RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 PHACTR4Q8IZ21 702 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 GSTCDQ8NEC7 633 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 OR5B17Q8NGF7 314 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 OR4D6Q8NGJ1 314 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 FIBINQ8TAL6 211 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 KISS1RQ969F8 398 aaPredicted RBP6.52□□□□□ -1.37
SMG1-217ENST00000569764 PHF21BQ96EK2 531 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 C5orf34Q96MH7 638 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 INTS14Q96SY0 518 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 THAP2Q9H0W7 228 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 APOBEC3GQ9HC16 384 aaKnown RBP6.52□□□□□ -1.37
SMG1-217ENST00000569764 ETNK2Q9NVF9 386 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 DAPK2Q9UIK4 370 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 NOCTQ9UK39 431 aaKnown RBP6.52□□□□□ -1.37
SMG1-217ENST00000569764 HCN2Q9UL51 889 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 VPS9D1Q9Y2B5 631 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 SLC9A8Q9Y2E8 581 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 THSD7BQ9C0I4 1608 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 RFPL2O75678 378 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 RPN2P04844 631 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 RYKP34925 604 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 PAFAH1B1P43034 410 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 PIK3CGP48736 1102 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 RAP1GDS1P52306 607 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 IST1P53990 364 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 RHAGQ02094 409 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 NHLH1Q02575 133 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 HTR4Q13639 388 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 GOLGA7BQ2TAP0 167 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 METTL21CQ5VZV1 264 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 OGFOD3Q6PK18 319 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 FAM35AQ86V20 835 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 OR2T3Q8NH03 318 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 ADAMTS15Q8TE58 950 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 DNAJA4Q8WW22 397 aaPredicted RBP6.51□□□□□ -1.37
SMG1-217ENST00000569764 TRNT1Q96Q11 434 aaKnown RBP6.51□□□□□ -1.37
SMG1-217ENST00000569764 RSRP1Q9BUV0 290 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 SIK2Q9H0K1 926 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 CWH43Q9H720 699 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 SEMA4GQ9NTN9 838 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 P4HTMQ9NXG6 502 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 GRHL1Q9NZI5 618 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 DNAJB11Q9UBS4 358 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 GPN3Q9UHW5 284 aaPredicted RBP6.51□□□□□ -1.37
SMG1-217ENST00000569764 NFU1Q9UMS0 254 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 COQ6Q9Y2Z9 468 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 PTRH2Q9Y3E5 179 aaKnown RBP6.51□□□□□ -1.37
SMG1-217ENST00000569764 HIDE1A8MVS5 230 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 CYP26A1O43174 497 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 B3GALT2O43825 422 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 CST3P01034 146 aaPredicted RBP6.51□□□□□ -1.37
SMG1-217ENST00000569764 LCP1P13796 627 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 CD6P30203 668 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 PBX3P40426 434 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 BMXP51813 675 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 P2RX3P56373 397 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 ACTR3P61158 418 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 RHOAP61586 193 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 ELOCQ15369 112 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 PHKG1Q16816 387 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 ANKS6Q68DC2 871 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 TPGS1Q6ZTW0 290 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 VASH1Q7L8A9 365 aaPredicted RBP6.51□□□□□ -1.37
SMG1-217ENST00000569764 ZNF280BQ86YH2 543 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 KRT78Q8N1N4 520 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 OR13C2Q8NGS9 318 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 RFFLQ8WZ73 363 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 KLHL25Q9H0H3 589 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 ZNF334Q9HCZ1 680 aaPredicted RBP6.51□□□□□ -1.37
SMG1-217ENST00000569764 CHST7Q9NS84 486 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 MMP17Q9ULZ9 603 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 MRPS7Q9Y2R9 242 aaKnown RBP6.51□□□□□ -1.37
SMG1-217ENST00000569764 RANBP2P49792 3224 aaKnown RBP6.51□□□□□ -1.37
SMG1-217ENST00000569764 CCDC162PA2VCL2 907 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 SUPT3HB4E1H0 165 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 QSOX1O00391 747 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 SLC30A4O14863 429 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 ASNA1O43681 348 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 TSHRP16473 764 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 PSMA2P25787 234 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 RRM2P31350 389 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 MARCKSL1P49006 195 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 STARD6P59095 220 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 ZNF45Q02386 682 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 EIF3IQ13347 325 aaKnown RBP6.51□□□□□ -1.37
SMG1-217ENST00000569764 GPR68Q15743 365 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 PPM1JQ5JR12 505 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 ADGRD1Q6QNK2 874 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 VITQ6UXI7 678 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 SYT13Q7L8C5 426 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 ACOT1Q86TX2 421 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 ADGRG2Q8IZP9 1017 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 POU5F2Q8N7G0 328 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 TMEM41AQ96HV5 264 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 SEMA3CQ99985 751 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 GPR62Q9BZJ7 368 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 SLC6A15Q9H2J7 730 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 DDIT4Q9NX09 232 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 CLEC5AQ9NY25 188 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 NOP53Q9NZM5 478 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms