RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 A8MUI8 341 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 C2orf74A8MZ97 194 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 SLC16A3O15427 465 aaKnown RBP6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 P4HA2O15460 535 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 MTX2O75431 263 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 RFC1P35251 1148 aaPredicted RBP6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 NR1H2P55055 460 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 DCDC1P59894 354 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 OCA2Q04671 838 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 CETN1Q12798 172 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 TMEM115Q12893 351 aaPredicted RBP6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 FASTKQ14296 549 aaKnown RBP6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 NFE2L1Q14494 772 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 CAMK4Q16566 473 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 CDO1Q16878 200 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 C15orf59Q2T9L4 293 aaPredicted RBP6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 CCDC14Q49A88 953 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 KHDC1Q4VXA5 237 aaKnown RBP6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 MIDNQ504T8 468 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 WIPI1Q5MNZ9 446 aaPredicted RBP6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 C6orf52Q5T4I8 152 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 ERICH6BQ5W0A0 696 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 FBXO42Q6P3S6 717 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 SPESP1Q6UW49 350 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 FAM83HQ6ZRV2 1179 aaPredicted RBP6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 TRAPPC5Q8IUR0 188 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 GRAMD1CQ8IYS0 662 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 DEPDC4Q8N2C3 294 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 PGBD5Q8N414 524 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 TRAM1L1Q8N609 369 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 LRRC17Q8N6Y2 441 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 ACVR1CQ8NER5 493 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 LCN9Q8WX39 176 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 IGFBPL1Q8WX77 278 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 CENPIQ92674 756 aaPredicted RBP6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 SLCO2A1Q92959 643 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 ZBED6CLQ96FA7 236 aaPredicted RBP6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 C12orf66Q96MD2 445 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 ZNF396Q96N95 335 aaPredicted RBP6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 USP28Q96RU2 1077 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 TUBB6Q9BUF5 446 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 NUP85Q9BW27 656 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 SPATA16Q9BXB7 569 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 ATG10Q9H0Y0 220 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 ZNF696Q9H7X3 374 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 ENAMQ9NRM1 1142 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 ZNF701Q9NV72 531 aaPredicted RBP6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 ACTR10Q9NZ32 417 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 NFKBIL1Q9UBC1 381 aaPredicted RBP6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 ZNF282Q9UDV7 671 aaPredicted RBP6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 MTRF1LQ9UGC7 380 aaKnown RBP6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 PLCL2Q9UPR0 1127 aa6.25□□□□□ -1.41
HERPUD1-217ENST00000569429 C1orf232A0A0U1RR37 186 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 OR14I1A6ND48 311 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 BECN2A8MW95 431 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 NPIPA2E9PIF3 369 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 NPIPA3F8WFD2 350 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 DVL2O14641 736 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 BCKDKO14874 412 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 SLC25A12O75746 678 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 POP7O75817 140 aaKnown RBP6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 MYL1P05976 194 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 SDC4P31431 198 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 CDH5P33151 784 aaPredicted RBP6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 HTR7P34969 479 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 OR1D4P47884 311 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 COMPP49747 757 aaPredicted RBP6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 EMP2P54851 167 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 VSX2P58304 361 aaPredicted RBP6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 FANCCQ00597 558 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 DSC2Q02487 901 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 OC90Q02509 493 aaPredicted RBP6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 AP1B1Q10567 949 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 CLEC12BQ2HXU8 276 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 ANKRD20A8PQ5CZ79 823 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 FCRLBQ6BAA4 426 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 ZNF585AQ6P3V2 769 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 FAM173BQ6P4H8 233 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 PAOXQ6QHF9 649 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 ARHGAP36Q6ZRI8 547 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 SLFN11Q7Z7L1 901 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 LAPTM4BQ86VI4 370 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 HOOK3Q86VS8 718 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 PRSS58Q8IYP2 241 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 ADGRF3Q8IZF5 1079 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 PLD6Q8N2A8 252 aaKnown RBP6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 AMER2Q8N7J2 671 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 EHBP1Q8NDI1 1231 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 CCHCR1Q8TD31 782 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 CREB3L4Q8TEY5 395 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 NPAS2Q99743 824 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 PLCD4Q9BRC7 762 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 SHARPINQ9H0F6 387 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 WWP1Q9H0M0 922 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 ESRP2Q9H6T0 727 aaKnown RBP6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 UPF2Q9HAU5 1272 aaKnown RBP6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 CUTCQ9NTM9 273 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 EURLQ9NYK6 297 aa6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 ARMCX3Q9UH62 379 aaPredicted RBP6.24□□□□□ -1.41
HERPUD1-217ENST00000569429 EIF3LQ9Y262 564 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms