RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 SLC22A18Q96BI1 424 aa18.19■□□□□ 0.5
SPSB3-210ENST00000568416 IP6K3Q96PC2 410 aa18.19■□□□□ 0.5
SPSB3-210ENST00000568416 TXLNGQ9NUQ3 528 aa18.19■□□□□ 0.5
SPSB3-210ENST00000568416 BFARQ9NZS9 450 aa18.19■□□□□ 0.5
SPSB3-210ENST00000568416 IFT80Q9P2H3 777 aaPredicted RBP18.19■□□□□ 0.5
SPSB3-210ENST00000568416 GPN3Q9UHW5 284 aaPredicted RBP18.19■□□□□ 0.5
SPSB3-210ENST00000568416 GNPTGQ9UJJ9 305 aa18.19■□□□□ 0.5
SPSB3-210ENST00000568416 TTLL8A6PVC2 850 aa18.18■□□□□ 0.5
SPSB3-210ENST00000568416 PRICKLE3O43900 615 aaPredicted RBP18.18■□□□□ 0.5
SPSB3-210ENST00000568416 CCDC175P0C221 793 aa18.18■□□□□ 0.5
SPSB3-210ENST00000568416 TPSB2P20231 275 aa18.18■□□□□ 0.5
SPSB3-210ENST00000568416 MGAT1P26572 445 aa18.18■□□□□ 0.5
SPSB3-210ENST00000568416 ARNTP27540 789 aa18.18■□□□□ 0.5
SPSB3-210ENST00000568416 OTX2P32243 289 aa18.18■□□□□ 0.5
SPSB3-210ENST00000568416 TPSAB1Q15661 275 aa18.18■□□□□ 0.5
SPSB3-210ENST00000568416 NKAIN1Q4KMZ8 207 aa18.18■□□□□ 0.5
SPSB3-210ENST00000568416 FCRL6Q6DN72 434 aa18.18■□□□□ 0.5
SPSB3-210ENST00000568416 GSTA5Q7RTV2 222 aa18.18■□□□□ 0.5
SPSB3-210ENST00000568416 MRGPREQ86SM8 312 aa18.18■□□□□ 0.5
SPSB3-210ENST00000568416 HPS6Q86YV9 775 aa18.18■□□□□ 0.5
SPSB3-210ENST00000568416 FAM26EQ8N5C1 309 aa18.18■□□□□ 0.5
SPSB3-210ENST00000568416 SMAD5Q99717 465 aaKnown RBP18.18■□□□□ 0.5
SPSB3-210ENST00000568416 NDC1Q9BTX1 674 aa18.18■□□□□ 0.5
SPSB3-210ENST00000568416 KIFC1Q9BW19 673 aa18.18■□□□□ 0.5
SPSB3-210ENST00000568416 MRM3Q9HC36 420 aaKnown RBP18.18■□□□□ 0.5
SPSB3-210ENST00000568416 SYBUQ9NX95 663 aa18.18■□□□□ 0.5
SPSB3-210ENST00000568416 NDOR1Q9UHB4 597 aa18.18■□□□□ 0.5
SPSB3-210ENST00000568416 G3BP2Q9UN86 482 aaKnown RBP18.18■□□□□ 0.5
SPSB3-210ENST00000568416 PTRH2Q9Y3E5 179 aaKnown RBP18.18■□□□□ 0.5
SPSB3-210ENST00000568416 A6NL46 340 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 KPNA5O15131 536 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 DPM1O60762 260 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 NDUFS3O75489 264 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 FOLR3P41439 243 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 CDK16Q00536 496 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 SLC9A5Q14940 896 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 CTSL3PQ5NE16 218 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 LRRC8BQ6P9F7 803 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 TAX1BP1Q86VP1 789 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 MCATQ8IVS2 390 aaKnown RBP18.17■□□□□ 0.5
SPSB3-210ENST00000568416 TRIM58Q8NG06 486 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 OR2Y1Q8NGV0 311 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 CPT1CQ8TCG5 803 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 COL26A1Q96A83 441 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 RAD51AP1Q96B01 352 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 MFSD3Q96ES6 412 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 RAB11FIP5Q9BXF6 653 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 ENAMQ9NRM1 1142 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 SLC22A11Q9NSA0 550 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 IRAK4Q9NWZ3 460 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 GPR83Q9NYM4 423 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.17■□□□□ 0.5
SPSB3-210ENST00000568416 SLC39A10Q9ULF5 831 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 MAP4K5Q9Y4K4 846 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 NFS1Q9Y697 457 aa18.17■□□□□ 0.5
SPSB3-210ENST00000568416 TCRBV7S3A2A0A539 114 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 C1orf105O95561 183 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 ITGAXP20702 1163 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 EIF3BP55884 814 aaKnown RBP18.16■□□□□ 0.5
SPSB3-210ENST00000568416 FOXL2P58012 376 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 KCTD19Q17RG1 926 aaPredicted RBP18.16■□□□□ 0.5
SPSB3-210ENST00000568416 TYSND1Q2T9J0 566 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 CCSMST1Q4G0I0 132 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 JMJD6Q6NYC1 403 aaPredicted RBP18.16■□□□□ 0.5
SPSB3-210ENST00000568416 TTC23LQ6PF05 361 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 FIGLAQ6QHK4 219 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 CES3Q6UWW8 571 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 TMEM151BQ8IW70 566 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 EFCAB3Q8N7B9 438 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 RBMXL3Q8N7X1 1067 aaKnown RBP18.16■□□□□ 0.5
SPSB3-210ENST00000568416 PRELID2Q8N945 189 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 Q8NA96 180 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 GALNT11Q8NCW6 608 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 LPGAT1Q92604 370 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 DLG3Q92796 817 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 PTERQ96BW5 349 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 FER1L6-AS2Q96M78 137 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 BIRC8Q96P09 236 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 INTS7Q9NVH2 962 aaKnown RBP18.16■□□□□ 0.5
SPSB3-210ENST00000568416 SOX13Q9UN79 622 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 MRFAP1Q9Y605 127 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 PIKFYVEQ9Y2I7 2098 aa18.16■□□□□ 0.5
SPSB3-210ENST00000568416 CEP104O60308 925 aa18.15■□□□□ 0.5
SPSB3-210ENST00000568416 VPS4BO75351 444 aa18.15■□□□□ 0.5
SPSB3-210ENST00000568416 VAPBO95292 243 aa18.15■□□□□ 0.5
SPSB3-210ENST00000568416 FKBP9O95302 570 aa18.15■□□□□ 0.5
SPSB3-210ENST00000568416 ONECUT2O95948 504 aa18.15■□□□□ 0.5
SPSB3-210ENST00000568416 IGHEP01854 428 aa18.15■□□□□ 0.5
SPSB3-210ENST00000568416 UMODP07911 640 aa18.15■□□□□ 0.5
SPSB3-210ENST00000568416 ATXN8OSP0DMR3 200 aa18.15■□□□□ 0.5
SPSB3-210ENST00000568416 BDKRB1P46663 353 aa18.15■□□□□ 0.5
SPSB3-210ENST00000568416 UQCRFS1P47985 274 aa18.15■□□□□ 0.5
SPSB3-210ENST00000568416 ARSFP54793 590 aa18.15■□□□□ 0.5
SPSB3-210ENST00000568416 SF1Q15637 639 aaKnown RBP18.15■□□□□ 0.5
SPSB3-210ENST00000568416 ZC3H12BQ5HYM0 836 aaKnown RBP18.15■□□□□ 0.5
SPSB3-210ENST00000568416 OTOAQ7RTW8 1153 aa18.15■□□□□ 0.5
SPSB3-210ENST00000568416 PPP1R32Q7Z5V6 425 aa18.15■□□□□ 0.5
SPSB3-210ENST00000568416 GSDMBQ8TAX9 411 aa18.15■□□□□ 0.5
SPSB3-210ENST00000568416 HMGCLL1Q8TB92 370 aa18.15■□□□□ 0.5
SPSB3-210ENST00000568416 DENND1AQ8TEH3 1009 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms