RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 GGTA1PQ4G0N0 100 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.03□□□□□ -0.8
CDH11-214ENST00000568340 KANK2Q63ZY3 851 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 GTF2H2CQ6P1K8 395 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 OGFOD3Q6PK18 319 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 RNF165Q6ZSG1 346 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 CCNYL1Q8N7R7 359 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 PPFIBP2Q8ND30 876 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 OR52E1Q8NGJ3 308 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 CFAP61Q8NHU2 1237 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 RFWD2Q8NHY2 731 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 SLC37A2Q8TED4 501 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 ZNF473Q8WTR7 871 aaKnown RBP10.03□□□□□ -0.8
CDH11-214ENST00000568340 SKA2Q8WVK7 121 aaPredicted RBP10.03□□□□□ -0.8
CDH11-214ENST00000568340 RAD51AP1Q96B01 352 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 PYCR2Q96C36 320 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 WDR34Q96EX3 536 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 MAELQ96JY0 434 aaKnown RBP10.03□□□□□ -0.8
CDH11-214ENST00000568340 FOPNLQ96NB1 174 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 CAMK1GQ96NX5 476 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 EGFL8Q99944 293 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 NTMT1Q9BV86 223 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 TRIT1Q9H3H1 467 aaKnown RBP10.03□□□□□ -0.8
CDH11-214ENST00000568340 TUBB1Q9H4B7 451 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 SLC32A1Q9H598 525 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 RABEP2Q9H5N1 569 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 INTS7Q9NVH2 962 aaKnown RBP10.03□□□□□ -0.8
CDH11-214ENST00000568340 UCKL1Q9NWZ5 548 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 PLAGL1Q9UM63 463 aa10.03□□□□□ -0.8
CDH11-214ENST00000568340 TMEM131Q92545 1883 aa10.02□□□□□ -0.8
CDH11-214ENST00000568340 KIR2DS5A0A0G2JLQ3 304 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 A0A0G2JNG1 304 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 A0A1B0GTQ1 180 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 PDZK1P1A8MUH7 402 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 PRR5-ARHGAP8B1AHC4 643 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 KIR2DS3K7RE56 304 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 IFRD1O00458 451 aaPredicted RBP10.02□□□□□ -0.81
CDH11-214ENST00000568340 YY2O15391 372 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 SNX2O60749 519 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 WFS1O76024 890 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 ESRRBO95718 433 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 HSPA4LO95757 839 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 VIMP08670 466 aaKnown RBP10.02□□□□□ -0.81
CDH11-214ENST00000568340 XRCC1P18887 633 aaPredicted RBP10.02□□□□□ -0.81
CDH11-214ENST00000568340 EPHA8P29322 1005 aaPredicted RBP10.02□□□□□ -0.81
CDH11-214ENST00000568340 FASLGP48023 281 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 RAB28P51157 221 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 PNLIPRP1P54315 467 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 YBX1P67809 324 aaKnown RBP10.02□□□□□ -0.81
CDH11-214ENST00000568340 GRIK2Q13002 908 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 KIR2DS5Q14953 304 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 PRRT3Q5FWE3 981 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 XKR7Q5GH72 579 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 PLA2G2CQ5R387 149 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 PRAMEF14Q5SWL7 426 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 SDR16C5Q8N3Y7 309 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 SLC25A45Q8N413 288 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 L3MBTL4Q8NA19 623 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 OR2L8Q8NGY9 312 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 PIWIL2Q8TC59 973 aaKnown RBP10.02□□□□□ -0.81
CDH11-214ENST00000568340 TRPC4APQ8TEL6 797 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 ATL1Q8WXF7 558 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 GRAMD1AQ96CP6 724 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 KCNA7Q96RP8 456 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 ELF4Q99607 663 aaPredicted RBP10.02□□□□□ -0.81
CDH11-214ENST00000568340 TRIM54Q9BYV2 358 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 ATG10Q9H0Y0 220 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 SLC40A1Q9NP59 571 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 SEMA4BQ9NPR2 832 aaPredicted RBP10.02□□□□□ -0.81
CDH11-214ENST00000568340 FSCN3Q9NQT6 498 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 POT1Q9NUX5 634 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 IMP3Q9NV31 184 aaKnown RBP10.02□□□□□ -0.81
CDH11-214ENST00000568340 KLHL14Q9P2G3 628 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 OPTCQ9UBM4 332 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 MARCOQ9UEW3 520 aaPredicted RBP10.02□□□□□ -0.81
CDH11-214ENST00000568340 SUSD2Q9UGT4 822 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 SLC22A14Q9Y267 594 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 USH1CQ9Y6N9 552 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 GPR179Q6PRD1 2367 aa10.02□□□□□ -0.81
CDH11-214ENST00000568340 IGKV1-8A0A0C4DH67 115 aa10.01□□□□□ -0.81
CDH11-214ENST00000568340 LY6G6EA0A0G2JKS1 128 aa10.01□□□□□ -0.81
CDH11-214ENST00000568340 PATE3B3GLJ2 98 aa10.01□□□□□ -0.81
CDH11-214ENST00000568340 SDHDO14521 159 aa10.01□□□□□ -0.81
CDH11-214ENST00000568340 AQP9O43315 295 aa10.01□□□□□ -0.81
CDH11-214ENST00000568340 SDC3O75056 442 aa10.01□□□□□ -0.81
CDH11-214ENST00000568340 WDR47O94967 919 aa10.01□□□□□ -0.81
CDH11-214ENST00000568340 MLYCDO95822 493 aa10.01□□□□□ -0.81
CDH11-214ENST00000568340 S100BP04271 92 aaPredicted RBP10.01□□□□□ -0.81
CDH11-214ENST00000568340 RPN2P04844 631 aa10.01□□□□□ -0.81
CDH11-214ENST00000568340 HIST1H2AGP0C0S8 130 aaPredicted RBP10.01□□□□□ -0.81
CDH11-214ENST00000568340 PRR35P0CG20 571 aa10.01□□□□□ -0.81
CDH11-214ENST00000568340 NPPBP16860 134 aa10.01□□□□□ -0.81
CDH11-214ENST00000568340 HIST1H2ADP20671 130 aa10.01□□□□□ -0.81
CDH11-214ENST00000568340 MAP4P27816 1152 aaKnown RBP10.01□□□□□ -0.81
CDH11-214ENST00000568340 CASP2P42575 452 aa10.01□□□□□ -0.81
CDH11-214ENST00000568340 PIK3CGP48736 1102 aa10.01□□□□□ -0.81
CDH11-214ENST00000568340 HTR6P50406 440 aa10.01□□□□□ -0.81
CDH11-214ENST00000568340 RPL14P50914 215 aaKnown RBP10.01□□□□□ -0.81
CDH11-214ENST00000568340 PKNOX1P55347 436 aa10.01□□□□□ -0.81
CDH11-214ENST00000568340 HNRNPKP61978 463 aaKnown RBP eCLIP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms