RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 IFRD1O00458 451 aaPredicted RBP6.87□□□□□ -1.31
SMG1-215ENST00000568239 MANBAO00462 879 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 MRASO14807 208 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 NRP2O60462 931 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 IMPA1P29218 277 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 SLC6A12P48065 614 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 CLDN2P57739 230 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 KCNK10P57789 538 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 SESN3P58005 492 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 UFM1P61960 85 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 CDC16Q13042 620 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 HERC3Q15034 1050 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 GSTA3Q16772 222 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 WASHC2DQ5SRD0 308 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 KIAA1161Q6NSJ0 714 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 METTL2BQ6P1Q9 378 aaKnown RBP6.87□□□□□ -1.31
SMG1-215ENST00000568239 SUSD1Q6UWL2 747 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 Q6ZS52 159 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 RD3Q7Z3Z2 195 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 SPATA19Q7Z5L4 167 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 C11orf96Q7Z7L8 435 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 KBTBD6Q86V97 674 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 FUNDC1Q8IVP5 155 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 TFGQ92734 400 aaPredicted RBP6.87□□□□□ -1.31
SMG1-215ENST00000568239 VPS33AQ96AX1 596 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 SLC39A3Q9BRY0 314 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 C1QTNF2Q9BXJ5 285 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 TEX101Q9BY14 249 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 TRPV5Q9NQA5 729 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 TRPS1Q9UHF7 1281 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 CA14Q9ULX7 337 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 SNX6Q9UNH7 406 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 KCNK6Q9Y257 313 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 CA5BQ9Y2D0 317 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 GPSM3Q9Y4H4 160 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 TMEM265A0A087WTH1 108 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 CACNB4O00305 520 aaPredicted RBP6.87□□□□□ -1.31
SMG1-215ENST00000568239 FBP2O00757 339 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 LSM1O15116 133 aaKnown RBP6.87□□□□□ -1.31
SMG1-215ENST00000568239 PDYNP01213 254 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 G6PDP11413 515 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 CLCNKAP51800 687 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 RAP1GDS1P52306 607 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 PLOD1Q02809 727 aaPredicted RBP6.87□□□□□ -1.31
SMG1-215ENST00000568239 PTK2BQ14289 1009 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 BNC2Q6ZN30 1099 aaPredicted RBP6.87□□□□□ -1.31
SMG1-215ENST00000568239 RGL4Q8IZJ4 473 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 FBXW8Q8N3Y1 598 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 RNF175Q8N4F7 328 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 TP53I13Q8NBR0 393 aaPredicted RBP6.87□□□□□ -1.31
SMG1-215ENST00000568239 OR5AR1Q8NGP9 310 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 HLA-CQ95604 372 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 LINC00615Q96LM1 132 aaPredicted RBP6.87□□□□□ -1.31
SMG1-215ENST00000568239 TEX37Q96LM6 180 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 IL17FQ96PD4 163 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 SERPINI1Q99574 410 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 ACAT2Q9BWD1 397 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 BTBD1Q9H0C5 482 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 DPEP2Q9H4A9 486 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 FBRSQ9HAH7 460 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 SDR39U1Q9NRG7 319 aaPredicted RBP6.87□□□□□ -1.31
SMG1-215ENST00000568239 AIG1Q9NVV5 245 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 NDE1Q9NXR1 346 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 NDUFAF1Q9Y375 327 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 GPR45Q9Y5Y3 372 aa6.87□□□□□ -1.31
SMG1-215ENST00000568239 CROCCQ5TZA2 2017 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 POM121BA6NF01 834 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 H0Y8X5 98 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 SLC28A1O00337 649 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 CHUKO15111 745 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 KMOO15229 486 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 PRAMEF4O60810 478 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 SLC22A3O75751 556 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 KRT36O76013 467 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 SLC35G4P0C7Q5 338 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 PRR35P0CG20 571 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 MYCLP1P12525 358 aaPredicted RBP6.86□□□□□ -1.31
SMG1-215ENST00000568239 IGFALSP35858 605 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 TRIM23P36406 574 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 MAPK9P45984 424 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 GNPDA1P46926 289 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 ACADVLP49748 655 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 ATP4BP51164 291 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 TPMTP51580 245 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 TBPL1P62380 186 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 PLIN5Q00G26 463 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 TFF2Q03403 129 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 CCINQ13939 588 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 TRMT5Q32P41 509 aaKnown RBP6.86□□□□□ -1.31
SMG1-215ENST00000568239 FBXO43Q4G163 708 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 PRAMEF9Q5VWM5 478 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 ANO7Q6IWH7 933 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 CAPN13Q6MZZ7 669 aaPredicted RBP6.86□□□□□ -1.31
SMG1-215ENST00000568239 OGFOD2Q6N063 350 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 DUS1LQ6P1R4 473 aaKnown RBP6.86□□□□□ -1.31
SMG1-215ENST00000568239 TMPRSS11BQ86T26 416 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 PGAM4Q8N0Y7 254 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 PCYOX1LQ8NBM8 494 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 FAM156AQ8NDB6 213 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 OR9A1PQ8NGU1 263 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms