RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 TNPO3Q9Y5L0 923 aaKnown RBP10.67□□□□□ -0.7
PALB2-206ENST00000568219 HAT1O14929 419 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 KERAO60938 352 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 CHI3L1P36222 383 aaPredicted RBP10.67□□□□□ -0.7
PALB2-206ENST00000568219 CLCNKBP51801 687 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 SLC16A1P53985 500 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 IL18Q14116 193 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 RCAN2Q14206 197 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 ACOX1Q15067 660 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 C16orf59Q7L2K0 433 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 PHC2Q8IXK0 858 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 ELMOD1Q8N336 334 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 UXS1Q8NBZ7 420 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 PROKR1Q8TCW9 393 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 NACC2Q96BF6 587 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 TM6SF2Q9BZW4 377 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 SPRTNQ9H040 489 aaPredicted RBP10.67□□□□□ -0.7
PALB2-206ENST00000568219 SMOC2Q9H3U7 446 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 CLN6Q9NWW5 311 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 SMPD4Q9NXE4 827 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 ATP6V1HQ9UI12 483 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 MKLN1Q9UL63 735 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 RAB23Q9ULC3 237 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 KCNH4Q9UQ05 1017 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 LYVE1Q9Y5Y7 322 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 ZNF487B1APH4 448 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 PRR23D1E9PI22 279 aaPredicted RBP10.67□□□□□ -0.7
PALB2-206ENST00000568219 APOL3O95236 402 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 PRR23D2P0DMB1 279 aaPredicted RBP10.67□□□□□ -0.7
PALB2-206ENST00000568219 HAPLN1P10915 354 aaPredicted RBP10.67□□□□□ -0.7
PALB2-206ENST00000568219 CA5AP35218 305 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 KIR3DL1P43629 444 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 ARCN1P48444 511 aaKnown RBP10.67□□□□□ -0.7
PALB2-206ENST00000568219 OLR1P78380 273 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 ZNF45Q02386 682 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 CREMQ03060 361 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 STARD3Q14849 445 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 ABRAXAS2Q15018 415 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 SNAPC1Q16533 368 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 PRAMEF19Q5SWL8 479 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 DPY19L3Q6ZPD9 716 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 GHDCQ8N2G8 530 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 ATP6V0D2Q8N8Y2 350 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 OR5H6Q8NGV6 325 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 FBXO32Q969P5 355 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 FAM126AQ9BYI3 521 aaPredicted RBP10.67□□□□□ -0.7
PALB2-206ENST00000568219 ZYG11BQ9C0D3 744 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 ABCC13Q9NSE7 274 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 PCDHB9Q9Y5E1 797 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 CENPBD1B2RD01 187 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 H3BM21 787 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 FPGTO14772 594 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 CPNE6O95741 557 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 ODC1P11926 461 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 GGT1P19440 569 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 TNFRSF1BP20333 461 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 ITPKAP23677 461 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 ZNF135P52742 658 aaPredicted RBP10.67□□□□□ -0.7
PALB2-206ENST00000568219 SLC39A12Q504Y0 691 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 DALRD3Q5D0E6 543 aaKnown RBP10.67□□□□□ -0.7
PALB2-206ENST00000568219 TMEM207Q6UWW9 146 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 NTAN1Q96AB6 310 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 MED8Q96G25 268 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 MSANTD3Q96H12 275 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 ZNF599Q96NL3 588 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 FYTTD1Q96QD9 318 aaKnown RBP10.67□□□□□ -0.7
PALB2-206ENST00000568219 SMIM14Q96QK8 99 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 POLR2J2Q9GZM3 115 aaKnown RBP10.67□□□□□ -0.7
PALB2-206ENST00000568219 ZNF385DQ9H6B1 395 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 ATP13A1Q9HD20 1204 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 ACOT13Q9NPJ3 140 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 PIM2Q9P1W9 311 aa10.67□□□□□ -0.7
PALB2-206ENST00000568219 GLI3P10071 1580 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 A0A1W2PQH9 124 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 GJB3O75712 270 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 HOXB8P17481 243 aaPredicted RBP10.66□□□□□ -0.7
PALB2-206ENST00000568219 TNNI3P19429 210 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 DNAJA1P31689 397 aaKnown RBP10.66□□□□□ -0.7
PALB2-206ENST00000568219 CDKN1CP49918 316 aaPredicted RBP10.66□□□□□ -0.7
PALB2-206ENST00000568219 SOX4Q06945 474 aaPredicted RBP10.66□□□□□ -0.7
PALB2-206ENST00000568219 ACSM2AQ08AH3 577 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 CTF1Q16619 201 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 RUNDC3AQ59EK9 446 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 ACSM2BQ68CK6 577 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 ASB18Q6ZVZ8 466 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 MOB2Q70IA6 237 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 TMEM151AQ8N4L1 468 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 TCF25Q9BQ70 676 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 ASPNQ9BXN1 380 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 EMILIN2Q9BXX0 1053 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 CIPCQ9C0C6 399 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 ATG10Q9H0Y0 220 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 ASB8Q9H765 288 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 RHCGQ9UBD6 479 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 RABL2BQ9UNT1 228 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 CFL2Q9Y281 166 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 TRPM3Q9HCF6 1732 aaPredicted RBP10.66□□□□□ -0.7
PALB2-206ENST00000568219 FAM92AA1XBS5 289 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 TNFRSF10AO00220 468 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 AP3D1O14617 1153 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms