RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 SCRG1O75711 98 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 HAUS5O94927 633 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 FURINP09958 794 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 PKLRP30613 574 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 ARL4CP56559 192 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 GPS2Q13227 327 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 GBX1Q14549 363 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 KYNUQ16719 465 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 CRTC2Q53ET0 693 aaPredicted RBP24.3■■□□□ 1.48
FANCA-228ENST00000567943 ZNF549Q6P9A3 640 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 TTC23LQ6PF05 361 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 BORAQ6PGQ7 559 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 CNSTQ6PJW8 725 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 ZNF517Q6ZMY9 492 aaPredicted RBP24.3■■□□□ 1.48
FANCA-228ENST00000567943 CDHR3Q6ZTQ4 885 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 LINC01555Q8NAE3 123 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 OR8K5Q8NH50 307 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 ARHGAP9Q9BRR9 750 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 ZC3H7BQ9UGR2 993 aaKnown RBP24.3■■□□□ 1.48
FANCA-228ENST00000567943 PCDHGA6Q9Y5G7 932 aa24.3■■□□□ 1.48
FANCA-228ENST00000567943 SPTA1P02549 2419 aa24.29■■□□□ 1.48
FANCA-228ENST00000567943 RAD51CO43502 376 aa24.29■■□□□ 1.48
FANCA-228ENST00000567943 MT-ND3P03897 115 aa24.29■■□□□ 1.48
FANCA-228ENST00000567943 CCNYL3P0C7X3 344 aa24.29■■□□□ 1.48
FANCA-228ENST00000567943 BDKRB1P46663 353 aa24.29■■□□□ 1.48
FANCA-228ENST00000567943 RAB28P51157 221 aa24.29■■□□□ 1.48
FANCA-228ENST00000567943 ACSBG2Q5FVE4 666 aa24.29■■□□□ 1.48
FANCA-228ENST00000567943 MAATS1Q7Z4T9 603 aa24.29■■□□□ 1.48
FANCA-228ENST00000567943 TMEM126BQ8IUX1 230 aa24.29■■□□□ 1.48
FANCA-228ENST00000567943 FOPNLQ96NB1 174 aa24.29■■□□□ 1.48
FANCA-228ENST00000567943 IL17FQ96PD4 163 aa24.29■■□□□ 1.48
FANCA-228ENST00000567943 WDR83Q9BRX9 315 aaKnown RBP24.29■■□□□ 1.48
FANCA-228ENST00000567943 DPH5Q9H2P9 285 aa24.29■■□□□ 1.48
FANCA-228ENST00000567943 PLAC1Q9HBJ0 212 aa24.29■■□□□ 1.48
FANCA-228ENST00000567943 TEX264Q9Y6I9 313 aa24.29■■□□□ 1.48
FANCA-228ENST00000567943 SPENQ96T58 3664 aaKnown RBP24.28■■□□□ 1.48
FANCA-228ENST00000567943 ISM1B1AKI9 464 aa24.28■■□□□ 1.48
FANCA-228ENST00000567943 CPNE3O75131 537 aaKnown RBP24.28■■□□□ 1.48
FANCA-228ENST00000567943 C1orf105O95561 183 aa24.28■■□□□ 1.48
FANCA-228ENST00000567943 TCN2P20062 427 aa24.28■■□□□ 1.48
FANCA-228ENST00000567943 ATP5DP30049 168 aa24.28■■□□□ 1.48
FANCA-228ENST00000567943 CLCN7P51798 805 aa24.28■■□□□ 1.48
FANCA-228ENST00000567943 DNASE1L3Q13609 305 aa24.28■■□□□ 1.48
FANCA-228ENST00000567943 LCN10Q6JVE6 187 aa24.28■■□□□ 1.48
FANCA-228ENST00000567943 C16orf46Q6P387 395 aa24.28■■□□□ 1.48
FANCA-228ENST00000567943 FAM20CQ8IXL6 584 aa24.28■■□□□ 1.48
FANCA-228ENST00000567943 C2orf73Q8N5S3 287 aaPredicted RBP24.28■■□□□ 1.48
FANCA-228ENST00000567943 C2CD4AQ8NCU7 369 aaPredicted RBP24.28■■□□□ 1.48
FANCA-228ENST00000567943 GABPB2Q8TAK5 448 aaPredicted RBP24.28■■□□□ 1.48
FANCA-228ENST00000567943 LRRC39Q96DD0 335 aa24.28■■□□□ 1.48
FANCA-228ENST00000567943 CERS2Q96G23 380 aa24.28■■□□□ 1.48
FANCA-228ENST00000567943 CATSPER2Q96P56 530 aa24.28■■□□□ 1.48
FANCA-228ENST00000567943 SLC30A3Q99726 388 aa24.28■■□□□ 1.48
FANCA-228ENST00000567943 ERP44Q9BS26 406 aa24.28■■□□□ 1.48
FANCA-228ENST00000567943 STARD5Q9NSY2 213 aa24.28■■□□□ 1.48
FANCA-228ENST00000567943 SLC39A10Q9ULF5 831 aa24.28■■□□□ 1.48
FANCA-228ENST00000567943 MED16Q9Y2X0 877 aa24.28■■□□□ 1.48
FANCA-228ENST00000567943 PCDHB3Q9Y5E6 796 aa24.28■■□□□ 1.48
FANCA-228ENST00000567943 TMEM150CB9EJG8 249 aa24.27■■□□□ 1.48
FANCA-228ENST00000567943 H3BMH7 237 aa24.27■■□□□ 1.48
FANCA-228ENST00000567943 NDC80O14777 642 aa24.27■■□□□ 1.48
FANCA-228ENST00000567943 MAP3K7O43318 606 aa24.27■■□□□ 1.48
FANCA-228ENST00000567943 KATNA1O75449 491 aa24.27■■□□□ 1.48
FANCA-228ENST00000567943 CD9P21926 228 aa24.27■■□□□ 1.48
FANCA-228ENST00000567943 GABRA4P48169 554 aa24.27■■□□□ 1.48
FANCA-228ENST00000567943 CARSP49589 748 aaKnown RBP24.27■■□□□ 1.48
FANCA-228ENST00000567943 PDIA2Q13087 525 aaKnown RBP24.27■■□□□ 1.48
FANCA-228ENST00000567943 CCSMST1Q4G0I0 132 aa24.27■■□□□ 1.48
FANCA-228ENST00000567943 ANKMY2Q8IV38 441 aa24.27■■□□□ 1.48
FANCA-228ENST00000567943 SPNS2Q8IVW8 549 aa24.27■■□□□ 1.48
FANCA-228ENST00000567943 BBOF1Q8ND07 529 aa24.27■■□□□ 1.48
FANCA-228ENST00000567943 GIMAP7Q8NHV1 300 aa24.27■■□□□ 1.48
FANCA-228ENST00000567943 KCNJ9Q92806 393 aa24.27■■□□□ 1.48
FANCA-228ENST00000567943 RAD51AP1Q96B01 352 aa24.27■■□□□ 1.48
FANCA-228ENST00000567943 SYTL2Q9HCH5 934 aa24.27■■□□□ 1.48
FANCA-228ENST00000567943 PPANQ9NQ55 473 aaKnown RBP24.27■■□□□ 1.48
FANCA-228ENST00000567943 GEMIN8Q9NWZ8 242 aaKnown RBP24.27■■□□□ 1.48
FANCA-228ENST00000567943 MRFAP1Q9Y605 127 aa24.27■■□□□ 1.48
FANCA-228ENST00000567943 COMMD10Q9Y6G5 202 aa24.27■■□□□ 1.48
FANCA-228ENST00000567943 TENM4Q6N022 2769 aa24.27■■□□□ 1.48
FANCA-228ENST00000567943 KRT87PA6NCN2 255 aa24.26■■□□□ 1.47
FANCA-228ENST00000567943 B8ZZF3 427 aa24.26■■□□□ 1.47
FANCA-228ENST00000567943 RASGRF2O14827 1237 aa24.26■■□□□ 1.47
FANCA-228ENST00000567943 CTSBP07858 339 aa24.26■■□□□ 1.47
FANCA-228ENST00000567943 RORAP35398 523 aa24.26■■□□□ 1.47
FANCA-228ENST00000567943 POLE2P56282 527 aa24.26■■□□□ 1.47
FANCA-228ENST00000567943 MC1RQ01726 317 aa24.26■■□□□ 1.47
FANCA-228ENST00000567943 CALCOCO2Q13137 446 aa24.26■■□□□ 1.47
FANCA-228ENST00000567943 KIR2DS3Q14952 304 aa24.26■■□□□ 1.47
FANCA-228ENST00000567943 KLHL38Q2WGJ6 581 aa24.26■■□□□ 1.47
FANCA-228ENST00000567943 DEFB109BQ30KR1 87 aa24.26■■□□□ 1.47
FANCA-228ENST00000567943 TTLL9Q3SXZ7 439 aa24.26■■□□□ 1.47
FANCA-228ENST00000567943 TAX1BP1Q86VP1 789 aa24.26■■□□□ 1.47
FANCA-228ENST00000567943 C19orf47Q8N9M1 422 aaKnown RBP24.26■■□□□ 1.47
FANCA-228ENST00000567943 GPR21Q99679 349 aa24.26■■□□□ 1.47
FANCA-228ENST00000567943 AARSD1Q9BTE6 412 aaKnown RBP24.26■■□□□ 1.47
FANCA-228ENST00000567943 FANCEQ9HB96 536 aa24.26■■□□□ 1.47
FANCA-228ENST00000567943 SLC17A6Q9P2U8 582 aa24.26■■□□□ 1.47
FANCA-228ENST00000567943 KCND3Q9UK17 655 aa24.26■■□□□ 1.47
FANCA-228ENST00000567943 A0A0J9YY10 115 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms