RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 TRPS1Q9UHF7 1281 aa10.42□□□□□ -0.74
UBFD1-205ENST00000566136 CYTH4Q9UIA0 394 aa10.42□□□□□ -0.74
UBFD1-205ENST00000566136 CNOT6Q9ULM6 557 aaKnown RBP10.42□□□□□ -0.74
UBFD1-205ENST00000566136 AP4B1Q9Y6B7 739 aa10.42□□□□□ -0.74
UBFD1-205ENST00000566136 C17orf102A2RUQ5 167 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 PRAMEF2O60811 474 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 VPS4BO75351 444 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 AGTP01019 485 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 PAEPP09466 180 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 CREB1P16220 341 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 IL7RP16871 459 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 MMP13P45452 471 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 TFDP1Q14186 410 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 DBN1Q16643 649 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 MST1LQ2TV78 715 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 WDR72Q3MJ13 1102 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 PTPN20Q4JDL3 420 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 BCL7AQ4VC05 210 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 ATAD3BQ5T9A4 648 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 PODNL1Q6PEZ8 512 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 TRMT10CQ7L0Y3 403 aaKnown RBP10.41□□□□□ -0.74
UBFD1-205ENST00000566136 C17orf47Q8NEP4 570 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 OR8K3Q8NH51 312 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 LIPHQ8WWY8 451 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 LENG1Q96BZ8 264 aaPredicted RBP10.41□□□□□ -0.74
UBFD1-205ENST00000566136 NXNL1Q96CM4 212 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 C9orf72Q96LT7 481 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 SDCBP2Q9H190 292 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 RIBC2Q9H4K1 309 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 SMYD3Q9H7B4 428 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 TBC1D13Q9NVG8 400 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 SIX4Q9UIU6 781 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 PLXNA1Q9UIW2 1896 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 A0A087WUV0 522 aaPredicted RBP10.41□□□□□ -0.74
UBFD1-205ENST00000566136 A0A1W2PN81 502 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 A0A1W2PPC1 479 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 CGB1A6NKQ9 187 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 ZNF785A8K8V0 405 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 GAS2O43903 313 aaKnown RBP10.41□□□□□ -0.74
UBFD1-205ENST00000566136 LRIG2O94898 1065 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 LSM8O95777 96 aaKnown RBP10.41□□□□□ -0.74
UBFD1-205ENST00000566136 CSTAP01040 98 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 VTNP04004 478 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 ZNF286BP0CG31 522 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 ACHEP22303 614 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 BMP8BP34820 402 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 EVI2BP34910 448 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 CHRNA7P36544 502 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 FRKP42685 505 aaPredicted RBP10.41□□□□□ -0.74
UBFD1-205ENST00000566136 AIF1P55008 147 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 MTTPP55157 894 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 STX1BP61266 288 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 RAB39AQ14964 217 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 HP1BP3Q5SSJ5 553 aaPredicted RBP10.41□□□□□ -0.74
UBFD1-205ENST00000566136 TSSK4Q6SA08 328 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 TMEM182Q6ZP80 229 aaPredicted RBP10.41□□□□□ -0.74
UBFD1-205ENST00000566136 BPIFCQ8NFQ6 507 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 JOSD2Q8TAC2 188 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 NT5C3BQ969T7 300 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 SLAMF9Q96A28 289 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 PABPC5Q96DU9 382 aaKnown RBP10.41□□□□□ -0.74
UBFD1-205ENST00000566136 CDRT15Q96T59 188 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 FAM192AQ9GZU8 254 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 TSPYL1Q9H0U9 437 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 C10orf88Q9H8K7 445 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 TLR9Q9NR96 1032 aa10.41□□□□□ -0.74
UBFD1-205ENST00000566136 TRMT6Q9UJA5 497 aaKnown RBP10.41□□□□□ -0.74
UBFD1-205ENST00000566136 A0A1W2PR77 199 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 KANSL1LA0AUZ9 987 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 KBTBD13C9JR72 458 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 HBP1O60381 514 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 INSRRP14616 1297 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 DRD4P21917 467 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 TACR1P25103 407 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 VIPR2P41587 438 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 CAMPP49913 170 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 CDH13P55290 713 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 DYNLT1P63172 113 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 FUT11Q495W5 492 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 CYP27C1Q4G0S4 372 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 RCOR2Q8IZ40 523 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 EMC1Q8N766 993 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 PHF21BQ96EK2 531 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 PIWIL1Q96J94 861 aaKnown RBP10.4□□□□□ -0.74
UBFD1-205ENST00000566136 PRMT1Q99873 361 aaKnown RBP10.4□□□□□ -0.74
UBFD1-205ENST00000566136 TMEM109Q9BVC6 243 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 MLXIPLQ9NP71 852 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 SDHAF3Q9NRP4 125 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 IL20RAQ9UHF4 553 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 ZNF148Q9UQR1 794 aa10.4□□□□□ -0.74
UBFD1-205ENST00000566136 SRRM3A6NNA2 597 aaPredicted RBP10.4□□□□□ -0.75
UBFD1-205ENST00000566136 TEX46H3BTG2 121 aa10.4□□□□□ -0.75
UBFD1-205ENST00000566136 B4GALT4O60513 344 aa10.4□□□□□ -0.75
UBFD1-205ENST00000566136 PAGE4O60829 102 aa10.4□□□□□ -0.75
UBFD1-205ENST00000566136 KLHL2O95198 593 aa10.4□□□□□ -0.75
UBFD1-205ENST00000566136 TTC4O95801 387 aa10.4□□□□□ -0.75
UBFD1-205ENST00000566136 PGK1P00558 417 aa10.4□□□□□ -0.75
UBFD1-205ENST00000566136 ITGB3P05106 788 aa10.4□□□□□ -0.75
UBFD1-205ENST00000566136 STAG3L1P0CL83 205 aa10.4□□□□□ -0.75
UBFD1-205ENST00000566136 PSMA2P25787 234 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms