RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 NSG1P42857 185 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 RAB28P51157 221 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 OGDHQ02218 1023 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 KIF5AQ12840 1032 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 HADHQ16836 314 aaKnown RBP8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 LONRF2Q1L5Z9 754 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 ATP13A5Q4VNC0 1218 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 BOLA3Q53S33 107 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 TFDP3Q5H9I0 405 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 ZNF766Q5HY98 468 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 LDLRAP1Q5SW96 308 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 ABHD17BQ5VST6 288 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 ATG9BQ674R7 924 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 TXNRD3NBQ6F5E7 133 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 CCDC70Q6NSX1 233 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 TIGD7Q6NT04 549 aaPredicted RBP8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 SHISA6Q6ZSJ9 500 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 CEP128Q6ZU80 1094 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 TTLL10Q6ZVT0 673 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 NCCRP1Q6ZVX7 275 aaPredicted RBP8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 VPS13CQ709C8 3753 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 POLNQ7Z5Q5 900 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 AMIGO1Q86WK6 493 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 FAM20CQ8IXL6 584 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 SIRT6Q8N6T7 355 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 SPDYE1Q8NFV5 336 aaPredicted RBP8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 MYRIPQ8NFW9 859 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 OR2L2Q8NH16 312 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 GOT1L1Q8NHS2 421 aaPredicted RBP8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 LIME1Q9H400 295 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 TFB2MQ9H5Q4 396 aaKnown RBP8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 SOX17Q9H6I2 414 aaPredicted RBP8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 NPDC1Q9NQX5 325 aaPredicted RBP8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 ACTR10Q9NZ32 417 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 TEKT2Q9UIF3 430 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 NPIPA1Q9UND3 350 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 PLCL2Q9UPR0 1127 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 PLEKHA6Q9Y2H5 1048 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 FBN1P35555 2871 aaKnown RBP8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 ATRQ13535 2644 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 FN1P02751 2386 aaKnown RBP8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 A0A1B0GX78 115 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 OR2AG2A6NM03 316 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 ADAM10O14672 748 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 TOXO94900 526 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 LY6G6DO95868 133 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 MT-CYBP00156 380 aaPredicted RBP8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 SLC4A1P02730 911 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 PTMAP06454 111 aaKnown RBP8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 POLBP06746 335 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 CCNCP24863 283 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 CXCR2P25025 360 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 PCSK6P29122 969 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 PBLDP30039 288 aaPredicted RBP8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 SLC1A1P43005 524 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 CTSCP53634 463 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 PPP2R2BQ00005 443 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 PMP22Q01453 160 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 NIPAL4Q0D2K0 466 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 FNBP1LQ5T0N5 605 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 ZDHHC20Q5W0Z9 365 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 SPESP1Q6UW49 350 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 RAD9BQ6WBX8 426 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 NAPRTQ6XQN6 538 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 C3P1Q6ZMU1 363 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 KIAA1328Q86T90 577 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 CFAP206Q8IYR0 622 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 GHDCQ8N2G8 530 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 RNF10Q8N5U6 811 aaKnown RBP8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 C19orf47Q8N9M1 422 aaKnown RBP8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 DTX3LQ8TDB6 740 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 MAML1Q92585 1016 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 FATE1Q969F0 183 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 CSPG4P5Q96PW8 444 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 PEBP4Q96S96 227 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 SPSB2Q99619 263 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 CRB3Q9BUF7 120 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 TSGA10Q9BZW7 698 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 UCK2Q9BZX2 261 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 ZNF395Q9H8N7 513 aaPredicted RBP8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 ZNF358Q9NW07 568 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 IL17CQ9P0M4 197 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 ANAPC7Q9UJX3 599 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 MKL2Q9ULH7 1088 aa8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 NSD1Q96L73 2696 aaPredicted RBP8.66□□□□□ -1.02
VPS9D1-205ENST00000565452 CACNA1CQ13936 2221 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 NCOA6Q14686 2063 aaPredicted RBP8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 FAM237BA0A1B0GVD1 139 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 NKX2-6A6NCS4 301 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 VSTM2BA6NLU5 285 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 IDSB3KWA1 339 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 PROSCO94903 275 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 CCDC175P0C221 793 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 PIRTP0C851 137 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 CD86P42081 329 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 GABRA4P48169 554 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 TMPRSS15P98073 1019 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 OCA2Q04671 838 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 TFF3Q07654 80 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms