RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 PANX3Q96QZ0 392 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 DPH2Q9BQC3 489 aaPredicted RBP9.66□□□□□ -0.86
CMTM3-209ENST00000565003 ING2Q9H160 280 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 ACSS2Q9NR19 701 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 HOMER3Q9NSC5 361 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 IL1RAPL1Q9NZN1 696 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 DHCR7Q9UBM7 475 aaKnown RBP9.66□□□□□ -0.86
CMTM3-209ENST00000565003 SOX13Q9UN79 622 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 AP1M2Q9Y6Q5 423 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 TNRC6AQ8NDV7 1962 aaKnown RBP9.66□□□□□ -0.86
CMTM3-209ENST00000565003 C9J4A7 227 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 RASGRF2O14827 1237 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 CNOT3O75175 753 aaKnown RBP9.65□□□□□ -0.86
CMTM3-209ENST00000565003 NIPSNAP2O75323 286 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 KLF7O75840 302 aaPredicted RBP9.65□□□□□ -0.86
CMTM3-209ENST00000565003 S1PR4O95977 384 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 KRT14P02533 472 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 RPN2P04844 631 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 HBQ1P09105 142 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 ATXN8OSP0DMR3 200 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 AGXTP21549 392 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 PSMB5P28074 263 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 GCGRP47871 477 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 CCL11P51671 97 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 FOXL2P58012 376 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 FOXK1P85037 733 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 SLC9A5Q14940 896 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 FCRL6Q6DN72 434 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 KIAA0930Q6ICG6 404 aaPredicted RBP9.65□□□□□ -0.86
CMTM3-209ENST00000565003 CNSTQ6PJW8 725 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 OTOAQ7RTW8 1153 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 CAND1Q86VP6 1230 aaKnown RBP9.65□□□□□ -0.86
CMTM3-209ENST00000565003 LRRC6Q86X45 466 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 TMEM151BQ8IW70 566 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 ZNF655Q8N720 491 aaPredicted RBP9.65□□□□□ -0.86
CMTM3-209ENST00000565003 TEX19Q8NA77 164 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 SKA2Q8WVK7 121 aaPredicted RBP9.65□□□□□ -0.86
CMTM3-209ENST00000565003 FAM136AQ96C01 138 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 DHRS4Q9BTZ2 278 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 SLC25A23Q9BV35 468 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 MLXIPLQ9NP71 852 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 EURLQ9NYK6 297 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 TSR3Q9UJK0 312 aaKnown RBP9.65□□□□□ -0.86
CMTM3-209ENST00000565003 PLCL2Q9UPR0 1127 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 PADI2Q9Y2J8 665 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 CRYL1Q9Y2S2 319 aa9.65□□□□□ -0.86
CMTM3-209ENST00000565003 PCDHGA9Q9Y5G4 932 aaKnown RBP9.65□□□□□ -0.86
CMTM3-209ENST00000565003 UBR5O95071 2799 aaPredicted RBP9.64□□□□□ -0.87
CMTM3-209ENST00000565003 RELNP78509 3460 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 GOLGA8MH3BSY2 632 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 KPNA5O15131 536 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 NRDCO43847 1150 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 PRICKLE3O43900 615 aaPredicted RBP9.64□□□□□ -0.87
CMTM3-209ENST00000565003 NRP2O60462 931 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 CEACAM4O75871 244 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 C1orf105O95561 183 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 F7P08709 466 aaPredicted RBP9.64□□□□□ -0.87
CMTM3-209ENST00000565003 ITGAXP20702 1163 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 OGNP20774 298 aaKnown RBP9.64□□□□□ -0.87
CMTM3-209ENST00000565003 FMO4P31512 558 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 GRIA3P42263 894 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 PGDP52209 483 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 MLLT10P55197 1068 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 DCDP81605 110 aaKnown RBP9.64□□□□□ -0.87
CMTM3-209ENST00000565003 ATP1A4Q13733 1029 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 GBX1Q14549 363 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 CYP1B1Q16678 543 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 RNF187Q5TA31 235 aaPredicted RBP9.64□□□□□ -0.87
CMTM3-209ENST00000565003 MLIPQ5VWP3 458 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 PAPD7Q5XG87 772 aaKnown RBP9.64□□□□□ -0.87
CMTM3-209ENST00000565003 MRNIPQ6NTE8 343 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 TLDC1Q6P9B6 456 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 FIGLAQ6QHK4 219 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 MRGPREQ86SM8 312 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 SDCCAG8Q86SQ7 713 aaPredicted RBP9.64□□□□□ -0.87
CMTM3-209ENST00000565003 CILP2Q8IUL8 1156 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 SPNS2Q8IVW8 549 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 GSDMBQ8TAX9 411 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 PROKR1Q8TCW9 393 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 DENND1AQ8TEH3 1009 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 MAGOHBQ96A72 148 aaKnown RBP9.64□□□□□ -0.87
CMTM3-209ENST00000565003 SLC22A18Q96BI1 424 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 PBKQ96KB5 322 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 SERPINB12Q96P63 405 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 RAB11FIP5Q9BXF6 653 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 SLC22A11Q9NSA0 550 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 TXLNGQ9NUQ3 528 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 IRAK4Q9NWZ3 460 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 IFT80Q9P2H3 777 aaPredicted RBP9.64□□□□□ -0.87
CMTM3-209ENST00000565003 GALPQ9UBC7 116 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 SLC39A10Q9ULF5 831 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 SRPK3Q9UPE1 567 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 PLAAQ9Y263 795 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 NEU2Q9Y3R4 380 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 JRKLQ9Y4A0 524 aa9.64□□□□□ -0.87
CMTM3-209ENST00000565003 ZCWPW2A0A1B0GU75 182 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 FAM237BA0A1B0GVD1 139 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 A0A1W2PPV9 198 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 ZNF185O15231 689 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 CTSVO60911 334 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms