RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 IL1RAPQ9NPH3 570 aa6.17□□□□□ -1.42
PTPN9-204ENST00000564970 NIT2Q9NQR4 276 aa6.17□□□□□ -1.42
PTPN9-204ENST00000564970 PRMT8Q9NR22 394 aaPredicted RBP6.17□□□□□ -1.42
PTPN9-204ENST00000564970 NANSQ9NR45 359 aa6.17□□□□□ -1.42
PTPN9-204ENST00000564970 ANKEF1Q9NU02 776 aa6.17□□□□□ -1.42
PTPN9-204ENST00000564970 METTL1Q9UBP6 276 aaKnown RBP6.17□□□□□ -1.42
PTPN9-204ENST00000564970 SLC9A2Q9UBY0 812 aa6.17□□□□□ -1.42
PTPN9-204ENST00000564970 POLLQ9UGP5 575 aa6.17□□□□□ -1.42
PTPN9-204ENST00000564970 TBC1D24Q9ULP9 559 aa6.17□□□□□ -1.42
PTPN9-204ENST00000564970 PLEKHA6Q9Y2H5 1048 aa6.17□□□□□ -1.42
PTPN9-204ENST00000564970 POLR3HQ9Y535 204 aaPredicted RBP6.17□□□□□ -1.42
PTPN9-204ENST00000564970 CSADQ9Y600 493 aa6.17□□□□□ -1.42
PTPN9-204ENST00000564970 SPATA31A1Q5TZJ5 1347 aa6.17□□□□□ -1.42
PTPN9-204ENST00000564970 PLIN4Q96Q06 1357 aa6.17□□□□□ -1.42
PTPN9-204ENST00000564970 CROCCQ5TZA2 2017 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 SIPA1L1O43166 1804 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 NAV1Q8NEY1 1877 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 GLYATL1P3A0A0U1RQE8 302 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 SLC22A23A1A5C7 686 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 TTC24A2A3L6 582 aaPredicted RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 C9orf170A2RU37 121 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 RRN3P2A6NIE6 340 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 A8MUA0 341 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 B4DXG7 233 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 TMEM189-UBE2V1I3L0A0 370 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 hCG_1984214I3L0E3 225 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 ITGB1BP1O14713 200 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 SCAMP1O15126 338 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 PMM2O15305 246 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 CLDN3O15551 220 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 GPAA1O43292 621 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 KCNQ2O43526 872 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 SELENOFO60613 162 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 MMP20O60882 483 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 RPP14O95059 124 aaKnown RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 BPNT1O95861 308 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 HLA-DQB1P01920 261 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 ALPLP05186 524 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 RPLP0P05388 317 aaKnown RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 APRTP07741 180 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 HOXC4P09017 264 aaPredicted RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 COX5BP10606 129 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 CYP19A1P11511 503 aaPredicted RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 FCER1AP12319 257 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 ANXA3P12429 323 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 RNH1P13489 461 aaKnown RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 NCF1P14598 390 aaPredicted RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 DAOP14920 347 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 CD1EP15812 388 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 NFKB1P19838 968 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 OGNP20774 298 aaKnown RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 RPS3P23396 243 aaKnown RBP eCLIP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 PRKCHP24723 683 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 GIFP27352 417 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 MSX1P28360 303 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 POLR2IP36954 125 aaKnown RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 CSKP41240 450 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 CRATP43155 626 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 RFX5P48382 616 aaPredicted RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 NRIP1P48552 1158 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 RBP2P50120 134 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 ERFP50548 548 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 BEX3Q00994 111 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 MLLT1Q03111 559 aaPredicted RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 SRSF11Q05519 484 aaKnown RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 FUT2Q10981 343 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 ZNF155Q12901 538 aaPredicted RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 BMPR2Q13873 1038 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 DAG1Q14118 895 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 CHRNA6Q15825 494 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 IL17AQ16552 155 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 HADHQ16836 314 aaKnown RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 ZNF528Q3MIS6 628 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 GXYLT1Q4G148 440 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 SLC39A12Q504Y0 691 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 FASTKD1Q53R41 847 aaKnown RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 AVPI1Q5T686 147 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 GPRC6AQ5T6X5 926 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 HACD4Q5VWC8 232 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 NXNL2Q5VZ03 156 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 INTS5Q6P9B9 1019 aaKnown RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 METAP1DQ6UB28 335 aaPredicted RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 ISLR2Q6UXK2 745 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 FAM92BQ6ZTR7 304 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 TRILQ7L0X0 811 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 NECAB2Q7Z6G3 386 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 ISCA2Q86U28 154 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 RNF130Q86XS8 419 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 PSTKQ8IV42 348 aaKnown RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 MAP4K3Q8IVH8 894 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 NAXDQ8IW45 347 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 RHOT1Q8IXI2 618 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 ADGRF4Q8IZF3 695 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 BLIDQ8IZY5 108 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 CCDC24Q8N4L8 307 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 ZNF527Q8NB42 609 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 IPMKQ8NFU5 416 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 AKR7LQ8NHP1 331 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 PLBD2Q8NHP8 589 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 SHKBP1Q8TBC3 707 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms