RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 NRTNQ99748 197 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 SLC12A9Q9BXP2 914 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 ASPSCR1Q9BZE9 553 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 OCIAD1Q9NX40 245 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 SOHLH2Q9NX45 425 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 TLK1Q9UKI8 766 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 PCDHB11Q9Y5F2 797 aa15.46■□□□□ 0.07
RAB40C-208ENST00000564703 PCM1Q15154 2024 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 EXOC1LA0A1B0GW35 172 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 TMEM8BA6NDV4 472 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 SLC9B1P1A6NJY1 282 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 B4E171 279 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 MYO1CO00159 1063 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 POLR1CO15160 346 aaPredicted RBP15.45■□□□□ 0.06
RAB40C-208ENST00000564703 RIPK2O43353 540 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 KRT38O76015 456 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 TUBBP07437 444 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 ABHD2P08910 425 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 FGF3P11487 239 aaPredicted RBP15.45■□□□□ 0.06
RAB40C-208ENST00000564703 UGT2B7P16662 529 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 ITIH1P19827 911 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 TSPAN7P41732 249 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 PGGT1BP53609 377 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 RAB15P59190 212 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 ERVPABLB-1P60509 514 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 MC2RQ01718 297 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 SLC29A2Q14542 456 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 IGF2-ASQ6U949 168 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 GSPT2Q8IYD1 628 aaKnown RBP15.45■□□□□ 0.06
RAB40C-208ENST00000564703 UBLCP1Q8WVY7 318 aaPredicted RBP15.45■□□□□ 0.06
RAB40C-208ENST00000564703 SLC44A1Q8WWI5 657 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 SMPDL3AQ92484 453 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 USP7Q93009 1102 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 OR2A14Q96R47 310 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 PDE7BQ9NP56 450 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 FBXO8Q9NRD0 319 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 INTS7Q9NVH2 962 aaKnown RBP15.45■□□□□ 0.06
RAB40C-208ENST00000564703 SPHK1Q9NYA1 384 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 SEMA5BQ9P283 1151 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 CTNNAL1Q9UBT7 734 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.45■□□□□ 0.06
RAB40C-208ENST00000564703 PDE10AQ9Y233 779 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 ACOT9Q9Y305 439 aa15.45■□□□□ 0.06
RAB40C-208ENST00000564703 V9GYY5 206 aaPredicted RBP15.45■□□□□ 0.06
RAB40C-208ENST00000564703 NVLO15381 856 aaKnown RBP15.44■□□□□ 0.06
RAB40C-208ENST00000564703 PHGDHO43175 533 aaKnown RBP15.44■□□□□ 0.06
RAB40C-208ENST00000564703 DXOO77932 396 aaKnown RBP15.44■□□□□ 0.06
RAB40C-208ENST00000564703 FKBP9O95302 570 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 ENO2P09104 434 aaPredicted RBP15.44■□□□□ 0.06
RAB40C-208ENST00000564703 CCDC166P0CW27 439 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 CNTFP26441 200 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 TYK2P29597 1187 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 OAS2P29728 719 aaKnown RBP15.44■□□□□ 0.06
RAB40C-208ENST00000564703 RPA3P35244 121 aaPredicted RBP15.44■□□□□ 0.06
RAB40C-208ENST00000564703 PNLIPRP1P54315 467 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 ACY1Q03154 408 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 ZNF460Q14592 562 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 CYP2A13Q16696 494 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 SLC5A12Q1EHB4 618 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 ERCC6LQ2NKX8 1250 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.44■□□□□ 0.06
RAB40C-208ENST00000564703 THEMIS2Q5TEJ8 643 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 TMEM207Q6UWW9 146 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 CEACAM20Q6UY09 585 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 CCDC91Q7Z6B0 441 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 TBC1D1Q86TI0 1168 aaPredicted RBP15.44■□□□□ 0.06
RAB40C-208ENST00000564703 TAX1BP1Q86VP1 789 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 BPHLQ86WA6 291 aaPredicted RBP15.44■□□□□ 0.06
RAB40C-208ENST00000564703 SPNS2Q8IVW8 549 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 CNPY4Q8N129 248 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 HMGCLL1Q8TB92 370 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 MDM1Q8TC05 714 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 ATL1Q8WXF7 558 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 N4BP2L2Q92802 583 aaPredicted RBP15.44■□□□□ 0.06
RAB40C-208ENST00000564703 FGF11Q92914 225 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 PRR11Q96HE9 360 aaPredicted RBP15.44■□□□□ 0.06
RAB40C-208ENST00000564703 SLC41A2Q96JW4 573 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 TEFMQ96QE5 360 aaKnown RBP15.44■□□□□ 0.06
RAB40C-208ENST00000564703 PAFAH2Q99487 392 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 ZPBPQ9BS86 351 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 B3GNT4Q9C0J1 378 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 ARL15Q9NXU5 204 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 DKK4Q9UBT3 224 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 ADAMTS6Q9UKP5 1117 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 COL27A1Q8IZC6 1860 aaPredicted RBP15.44■□□□□ 0.06
RAB40C-208ENST00000564703 ANKRD12Q6UB98 2062 aa15.44■□□□□ 0.06
RAB40C-208ENST00000564703 A0A0J9YY10 115 aa15.43■□□□□ 0.06
RAB40C-208ENST00000564703 A0A1W2PNU3 283 aaPredicted RBP15.43■□□□□ 0.06
RAB40C-208ENST00000564703 KRT37O76014 449 aa15.43■□□□□ 0.06
RAB40C-208ENST00000564703 TSPAN12O95859 305 aa15.43■□□□□ 0.06
RAB40C-208ENST00000564703 SLC16A8O95907 504 aa15.43■□□□□ 0.06
RAB40C-208ENST00000564703 MYBL2P10244 700 aa15.43■□□□□ 0.06
RAB40C-208ENST00000564703 AP1S2P56377 157 aa15.43■□□□□ 0.06
RAB40C-208ENST00000564703 ATP6V0D1P61421 351 aa15.43■□□□□ 0.06
RAB40C-208ENST00000564703 VSNL1P62760 191 aa15.43■□□□□ 0.06
RAB40C-208ENST00000564703 IL11RAQ14626 422 aa15.43■□□□□ 0.06
RAB40C-208ENST00000564703 TAF1BQ53T94 588 aaPredicted RBP15.43■□□□□ 0.06
RAB40C-208ENST00000564703 UBAP2Q5T6F2 1119 aaKnown RBP15.43■□□□□ 0.06
RAB40C-208ENST00000564703 WDR93Q6P2C0 686 aa15.43■□□□□ 0.06
RAB40C-208ENST00000564703 FRA10AC1Q70Z53 315 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms