RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 ZNF831Q5JPB2 1677 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 ADCY9O60503 1353 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 MAGEB17A8MXT2 336 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 SLC22A2O15244 555 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 PTP4A3O75365 173 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 STARD3NLO95772 234 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 ICAM1P05362 532 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 HSPA1AP0DMV8 641 aaKnown RBP3.81□□□□□ -1.8
CHD9-212ENST00000564641 HSPA1BP0DMV9 641 aaKnown RBP3.81□□□□□ -1.8
CHD9-212ENST00000564641 ACADMP11310 421 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 UBL4AP11441 157 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 MMP15P51511 669 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 DSCR10P59022 87 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 SETQ01105 290 aaPredicted RBP3.81□□□□□ -1.8
CHD9-212ENST00000564641 PPARDQ03181 441 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 MFAP5Q13361 173 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 MVPQ14764 893 aaKnown RBP3.81□□□□□ -1.8
CHD9-212ENST00000564641 NAB2Q15742 525 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 SNX30Q5VWJ9 437 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 ZNF530Q6P9A1 599 aaPredicted RBP3.81□□□□□ -1.8
CHD9-212ENST00000564641 KRT74Q7RTS7 529 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 ISCA2Q86U28 154 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 CCDC190Q86UF4 302 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 PTOV1Q86YD1 416 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 HSCBQ8IWL3 235 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 DIS3L2Q8IYB7 885 aaKnown RBP3.81□□□□□ -1.8
CHD9-212ENST00000564641 TTC5Q8N0Z6 440 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 RASGEF1CQ8N431 466 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 ZNF611Q8N823 705 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 OR2T12Q8NG77 320 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 FAM222BQ8WU58 562 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 PIGBQ92521 554 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 GIMAP5Q96F15 307 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 PIP5K1AQ99755 562 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 RTP3Q9BQQ7 232 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 MUC13Q9H3R2 512 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 PCDHB16Q9NRJ7 776 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 KRT84Q9NSB2 600 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 EXOGQ9Y2C4 368 aaKnown RBP3.81□□□□□ -1.8
CHD9-212ENST00000564641 RGPD2P0DJD1 1756 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 SHANK3Q9BYB0 1731 aa3.81□□□□□ -1.8
CHD9-212ENST00000564641 NCAPD2Q15021 1401 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 PASKQ96RG2 1323 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 MAPK8IP3Q9UPT6 1336 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 ARFGEF1Q9Y6D6 1849 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 ZBTB43O43298 467 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 SYNCRIPO60506 623 aaKnown RBP3.8□□□□□ -1.8
CHD9-212ENST00000564641 PLOD3O60568 738 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 CCNDBP1O95273 360 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 MLYCDO95822 493 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 HIST1H2ABP04908 130 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 EDN1P05305 212 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 HMBSP08397 361 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 HIST1H2ADP20671 130 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 HOXD13P35453 343 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 BSGP35613 385 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 TMEM115Q12893 351 aaPredicted RBP3.8□□□□□ -1.8
CHD9-212ENST00000564641 GAGE2BQ13066 116 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 CUL4AQ13619 759 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 GAGE2EQ4V326 116 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 FFAR4Q5NUL3 377 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 ADAMTSL4-AS1Q5T5F5 129 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 HAUS3Q68CZ6 603 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 GAGE2AQ6NT46 116 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 TPRG1Q6ZUI0 275 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 HIST3H2AQ7L7L0 130 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 P2RY8Q86VZ1 359 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 PLD3Q8IV08 490 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 ZNF614Q8N883 585 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 LSMEM1Q8N8F7 131 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 TMEM116Q8NCL8 245 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 OR2T6Q8NHC8 308 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 GHITMQ9H3K2 345 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 SCPEP1Q9HB40 452 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 GAGE2DQ9UEU5 116 aa3.8□□□□□ -1.8
CHD9-212ENST00000564641 CICQ96RK0 1608 aaPredicted RBP3.8□□□□□ -1.8
CHD9-212ENST00000564641 C10orf71Q711Q0 1435 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 KIF13BQ9NQT8 1826 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 USP42Q9H9J4 1324 aaKnown RBP3.79□□□□□ -1.8
CHD9-212ENST00000564641 TNRC6CQ9HCJ0 1690 aaKnown RBP3.79□□□□□ -1.8
CHD9-212ENST00000564641 PLK4O00444 970 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 PLOD2O00469 737 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 SMAD9O15198 467 aaKnown RBP3.79□□□□□ -1.8
CHD9-212ENST00000564641 DOK2O60496 412 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 SORBS2O94875 1100 aaKnown RBP3.79□□□□□ -1.8
CHD9-212ENST00000564641 NADKO95544 446 aaPredicted RBP3.79□□□□□ -1.8
CHD9-212ENST00000564641 CEBPBP17676 345 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 ANXA7P20073 488 aaKnown RBP3.79□□□□□ -1.8
CHD9-212ENST00000564641 EPHA2P29317 976 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 TM4SF1P30408 202 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 WNT5AP41221 380 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 HARS2P49590 506 aaKnown RBP3.79□□□□□ -1.8
CHD9-212ENST00000564641 GTF2A1P52655 376 aaPredicted RBP3.79□□□□□ -1.8
CHD9-212ENST00000564641 SLC8A3P57103 927 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 TEFQ10587 303 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 MAMLD1Q13495 774 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 GTDC1Q4AE62 458 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 FAM109BQ6ICB4 259 aaPredicted RBP3.79□□□□□ -1.8
CHD9-212ENST00000564641 SPINK14Q6IE38 97 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms