RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 C16orf45Q96MC5 204 aaPredicted RBP13.21□□□□□ -0.29
CNOT1-206ENST00000564557 OR2A14Q96R47 310 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 ERP44Q9BS26 406 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 PITPNM3Q9BZ71 974 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 SPRY4Q9C004 299 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 RAB17Q9H0T7 212 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 DPH5Q9H2P9 285 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 KLHL42Q9P2K6 505 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 TRMT6Q9UJA5 497 aaKnown RBP13.21□□□□□ -0.29
CNOT1-206ENST00000564557 KCND3Q9UK17 655 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 PCDHB3Q9Y5E6 796 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 NFS1Q9Y697 457 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 FAM208BQ5VWN6 2430 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 LOC101059948A0A1B0GTJ6 334 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 ZNF839A8K0R7 811 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 KATNA1O75449 491 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 URI1O94763 535 aaPredicted RBP13.2□□□□□ -0.3
CNOT1-206ENST00000564557 NTRK1P04629 796 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 F7P08709 466 aaPredicted RBP13.2□□□□□ -0.3
CNOT1-206ENST00000564557 ENO3P13929 434 aaPredicted RBP13.2□□□□□ -0.3
CNOT1-206ENST00000564557 ZNF28P17035 718 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 DLSTP36957 453 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 SKIV2L2P42285 1042 aaKnown RBP13.2□□□□□ -0.3
CNOT1-206ENST00000564557 RPL21P46778 160 aaKnown RBP13.2□□□□□ -0.3
CNOT1-206ENST00000564557 RGS4P49798 205 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 MRPS25P82663 173 aaKnown RBP13.2□□□□□ -0.3
CNOT1-206ENST00000564557 ACSBG2Q5FVE4 666 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 KIAA0408Q6ZU52 694 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 NEK10Q6ZWH5 1172 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 TRIM73Q86UV7 250 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 ANKMY2Q8IV38 441 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 PALM2Q8IXS6 379 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 C19orf47Q8N9M1 422 aaKnown RBP13.2□□□□□ -0.3
CNOT1-206ENST00000564557 C2CD4AQ8NCU7 369 aaPredicted RBP13.2□□□□□ -0.3
CNOT1-206ENST00000564557 ZNF501Q96CX3 271 aaPredicted RBP13.2□□□□□ -0.3
CNOT1-206ENST00000564557 PWWP2AQ96N64 755 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 IL17FQ96PD4 163 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 GPR21Q99679 349 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 SPHK1Q9NYA1 384 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 TAS2R13Q9NYV9 303 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 WHRNQ9P202 907 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 RUVBL2Q9Y230 463 aaKnown RBP13.2□□□□□ -0.3
CNOT1-206ENST00000564557 DHRS7Q9Y394 339 aa13.2□□□□□ -0.3
CNOT1-206ENST00000564557 PABPN1LA6NDY0 278 aaKnown RBP13.19□□□□□ -0.3
CNOT1-206ENST00000564557 E7EQ34 232 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 RAD51CO43502 376 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 ZBTB14O43829 449 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 SYF2O95926 243 aaKnown RBP13.19□□□□□ -0.3
CNOT1-206ENST00000564557 HBQ1P09105 142 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 TPBGLP0DKB5 382 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 CBSLP0DN79 551 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 TCN2P20062 427 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 OAS2P29728 719 aaKnown RBP13.19□□□□□ -0.3
CNOT1-206ENST00000564557 CBSP35520 551 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 STAT5AP42229 794 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 CLCN7P51798 805 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 ITGA1P56199 1179 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 CUL1Q13616 776 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 TSTA3Q13630 321 aaPredicted RBP13.19□□□□□ -0.3
CNOT1-206ENST00000564557 LRRC8EQ6NSJ5 796 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 IGDCC3Q8IVU1 814 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 ZBED8Q8IZ13 594 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 LSM14AQ8ND56 463 aaKnown RBP13.19□□□□□ -0.3
CNOT1-206ENST00000564557 FBXO36Q8NEA4 188 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 OR9A1PQ8NGU1 263 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 PYROXD1Q8WU10 500 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 MR1Q95460 341 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 SLC45A3Q96JT2 553 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 AARSD1Q9BTE6 412 aaKnown RBP13.19□□□□□ -0.3
CNOT1-206ENST00000564557 LHX9Q9NQ69 397 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 SPATA7Q9P0W8 599 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 ZFATQ9P243 1243 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 GALPQ9UBC7 116 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 TEX264Q9Y6I9 313 aa13.19□□□□□ -0.3
CNOT1-206ENST00000564557 LAMA5O15230 3695 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 ATXN7O15265 892 aaPredicted RBP13.18□□□□□ -0.3
CNOT1-206ENST00000564557 FKBP9O95302 570 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 TIAF1O95411 115 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 MATN4O95460 622 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 TUBB4AP04350 444 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 MSL3P1P0C860 447 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 MPC1LP0DKB6 136 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 HSD17B2P37059 387 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 RPS15P62841 145 aaKnown RBP13.18□□□□□ -0.3
CNOT1-206ENST00000564557 CAV1Q03135 178 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 TEDDM1Q5T9Z0 273 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 C16orf46Q6P387 395 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 ZNF549Q6P9A3 640 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 CDHR3Q6ZTQ4 885 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 GPATCH11Q8N954 259 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 WBP1Q96G27 269 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 CATSPER2Q96P56 530 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 NDNQ99608 321 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 ACTR5Q9H9F9 607 aaPredicted RBP13.18□□□□□ -0.3
CNOT1-206ENST00000564557 CDC23Q9UJX2 597 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 CROTQ9UKG9 612 aa13.18□□□□□ -0.3
CNOT1-206ENST00000564557 KIF2AO00139 706 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-206ENST00000564557 TK2O00142 265 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 EIF3FO00303 357 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-206ENST00000564557 PSIP1O75475 530 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms