RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 BOP1Q14137 746 aaKnown RBP17.27■□□□□ 0.36
GDE1-203ENST00000564172 FGL2Q14314 439 aa17.27■□□□□ 0.36
GDE1-203ENST00000564172 UNC50Q53HI1 259 aa17.27■□□□□ 0.36
GDE1-203ENST00000564172 PLEKHS1Q5SXH7 462 aa17.27■□□□□ 0.36
GDE1-203ENST00000564172 TMTC4Q5T4D3 741 aa17.27■□□□□ 0.36
GDE1-203ENST00000564172 CCDC81Q6ZN84 652 aa17.27■□□□□ 0.36
GDE1-203ENST00000564172 RAB44Q7Z6P3 723 aaPredicted RBP17.27■□□□□ 0.36
GDE1-203ENST00000564172 ELMO1Q92556 727 aa17.27■□□□□ 0.36
GDE1-203ENST00000564172 PLEKHA8Q96JA3 519 aa17.27■□□□□ 0.36
GDE1-203ENST00000564172 FAM126AQ9BYI3 521 aaPredicted RBP17.27■□□□□ 0.36
GDE1-203ENST00000564172 SHCBP1LQ9BZQ2 653 aa17.27■□□□□ 0.36
GDE1-203ENST00000564172 GSTO2Q9H4Y5 243 aa17.27■□□□□ 0.36
GDE1-203ENST00000564172 EPHX3Q9H6B9 360 aa17.27■□□□□ 0.36
GDE1-203ENST00000564172 ADAMTS6Q9UKP5 1117 aa17.27■□□□□ 0.36
GDE1-203ENST00000564172 FZD4Q9ULV1 537 aa17.27■□□□□ 0.36
GDE1-203ENST00000564172 CA14Q9ULX7 337 aa17.27■□□□□ 0.36
GDE1-203ENST00000564172 H3BSA7 217 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 ZNF701M0R085 212 aaPredicted RBP17.27■□□□□ 0.35
GDE1-203ENST00000564172 SULT1C4O75897 302 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 BAG2O95816 211 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 NDUFV2P19404 249 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 MPSTP25325 297 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 FOLH1Q04609 750 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 PPP1R3AQ16821 1122 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 ADAMTSL4Q6UY14 1074 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 Q6ZS52 159 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 FRMD7Q6ZUT3 714 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 USP30Q70CQ3 517 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 KBTBD6Q86V97 674 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 AGR3Q8TD06 166 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 ASZ1Q8WWH4 475 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 ATL1Q8WXF7 558 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 C1QTNF2Q9BXJ5 285 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 ZCCHC2Q9C0B9 1178 aaKnown RBP17.27■□□□□ 0.35
GDE1-203ENST00000564172 OR2AG1Q9H205 316 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 PRDM6Q9NQX0 595 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 ZDHHC2Q9UIJ5 367 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 CDYLQ9Y232 598 aa17.27■□□□□ 0.35
GDE1-203ENST00000564172 NUMA1Q14980 2115 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 A0A1W2PQU0 124 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 LRRC14BA6NHZ5 514 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 H3BNX3 289 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 RGS13O14921 159 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 CASQ2O14958 399 aaPredicted RBP17.26■□□□□ 0.35
GDE1-203ENST00000564172 NUAK1O60285 661 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 ATG13O75143 517 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 GPC4O75487 556 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 PCCBP05166 539 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 ACADMP11310 421 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 RPL14P50914 215 aaKnown RBP17.26■□□□□ 0.35
GDE1-203ENST00000564172 THOP1P52888 689 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 KIAA1161Q6NSJ0 714 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 RIPOR1Q6ZS17 1223 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 VRK3Q8IV63 474 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 DLG3Q92796 817 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 KLK6Q92876 244 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 COX14Q96I36 57 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 PHF12Q96QT6 1004 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 PSD2Q9BQI7 771 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 MBNL1Q9NR56 388 aaKnown RBP17.26■□□□□ 0.35
GDE1-203ENST00000564172 CD274Q9NZQ7 290 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 NCKAP1Q9Y2A7 1128 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 B3GNT3Q9Y2A9 372 aa17.26■□□□□ 0.35
GDE1-203ENST00000564172 TBC1D3DA0A087WVF3 549 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 TBC1D3IA0A087WXS9 549 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 TBC1D3EA0A087X179 549 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 TBC1D3KA0A087X1G2 549 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 TCRBV21S2A2A0A5A6 115 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 TBC1D3FA6NER0 549 aaPredicted RBP17.25■□□□□ 0.35
GDE1-203ENST00000564172 TMEM202A6NGA9 273 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 TBC1D3LB9A6J9 549 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 STX16-NPEPL1H3BU86 382 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 ZNF195O14628 629 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 STX16O14662 325 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 RSL1D1O76021 490 aaKnown RBP17.25■□□□□ 0.35
GDE1-203ENST00000564172 ENO2P09104 434 aaPredicted RBP17.25■□□□□ 0.35
GDE1-203ENST00000564172 TBC1D3HP0C7X1 549 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 KRT6CP48668 564 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 ALDH18A1P54886 795 aaKnown RBP17.25■□□□□ 0.35
GDE1-203ENST00000564172 GALNT1Q10472 559 aaPredicted RBP17.25■□□□□ 0.35
GDE1-203ENST00000564172 FBXO48Q5FWF7 155 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 TBC1D3GQ6DHY5 549 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 TBC1D3CQ6IPX1 549 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 KIAA1324Q6UXG2 1013 aaKnown RBP17.25■□□□□ 0.35
GDE1-203ENST00000564172 MAMSTRQ6ZN01 415 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 FRA10AC1Q70Z53 315 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 MAVSQ7Z434 540 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 HEATR4Q86WZ0 1026 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 TBC1D3Q8IZP1 549 aaPredicted RBP17.25■□□□□ 0.35
GDE1-203ENST00000564172 ZNF687Q8N1G0 1237 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 ICA1LQ8NDH6 482 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 CCM2Q9BSQ5 444 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 TRMOQ9BU70 441 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 S100A14Q9HCY8 104 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 CD93Q9NPY3 652 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 SNX2O60749 519 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 RNGTTO60942 597 aaKnown RBP17.25■□□□□ 0.35
GDE1-203ENST00000564172 FOSL1P15407 271 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 GABRG2P18507 467 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 CDH13P55290 713 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms