RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.92□□□□□ -0.82
SF3B3-204ENST00000563739 SH3BGRL2Q9UJC5 107 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 ZNF835Q9Y2P0 537 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 SCN2AQ99250 2005 aa9.92□□□□□ -0.82
SF3B3-204ENST00000563739 FITM1A5D6W6 292 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 BHMG1C9JSJ3 638 aaPredicted RBP9.91□□□□□ -0.82
SF3B3-204ENST00000563739 GOLGA6L19H0YKK7 550 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 ADAM10O14672 748 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 APOL1O14791 398 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 DSCR3O14972 297 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 PPP1R12AO14974 1030 aaPredicted RBP9.91□□□□□ -0.82
SF3B3-204ENST00000563739 HPP00738 406 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 PRR35P0CG20 571 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 PYGMP11217 842 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 ATP1B2P14415 290 aaPredicted RBP9.91□□□□□ -0.82
SF3B3-204ENST00000563739 IGFBP2P18065 325 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 PKLRP30613 574 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 SSTR2P30874 369 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 OR1D4P47884 311 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 DYNLT1P63172 113 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 TPM4P67936 248 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 SLC5A12Q1EHB4 618 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 ALKBH5Q6P6C2 394 aaKnown RBP9.91□□□□□ -0.82
SF3B3-204ENST00000563739 RANBP10Q6VN20 620 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 NAPRTQ6XQN6 538 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 MAP7D3Q8IWC1 876 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 CLDN19Q8N6F1 224 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 TFGQ92734 400 aaPredicted RBP9.91□□□□□ -0.82
SF3B3-204ENST00000563739 RUBCNLQ9H714 662 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 C10orf88Q9H8K7 445 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 MRM3Q9HC36 420 aaKnown RBP9.91□□□□□ -0.82
SF3B3-204ENST00000563739 TXLNGQ9NUQ3 528 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 PLCL2Q9UPR0 1127 aa9.91□□□□□ -0.82
SF3B3-204ENST00000563739 INTS1Q8N201 2190 aaKnown RBP9.9□□□□□ -0.82
SF3B3-204ENST00000563739 IGLV3-12A0A075B6K2 115 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 SLC5A10A0PJK1 596 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 STX7O15400 261 aaKnown RBP9.9□□□□□ -0.82
SF3B3-204ENST00000563739 CTSVO60911 334 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 CD63P08962 238 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 AGAP20933 346 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 SHMT2P34897 504 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 CDKN2BP42772 138 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 TLE4Q04727 773 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 KLC1Q07866 573 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 TAF1AQ15573 450 aaPredicted RBP9.9□□□□□ -0.82
SF3B3-204ENST00000563739 RBBP7Q16576 425 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 ASTE1Q2TB18 679 aaPredicted RBP9.9□□□□□ -0.82
SF3B3-204ENST00000563739 Q6ZPB1 254 aaPredicted RBP9.9□□□□□ -0.82
SF3B3-204ENST00000563739 FGD2Q7Z6J4 655 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 LAPTM4BQ86VI4 370 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 KLHDC8BQ8IXV7 354 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 SIRT6Q8N6T7 355 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 HAS2Q92819 552 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.9□□□□□ -0.82
SF3B3-204ENST00000563739 MTFMTQ96DP5 389 aaKnown RBP9.9□□□□□ -0.82
SF3B3-204ENST00000563739 MAGEB10Q96LZ2 347 aaPredicted RBP9.9□□□□□ -0.82
SF3B3-204ENST00000563739 C10orf90Q96M02 699 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 QKIQ96PU8 341 aaKnown RBP eCLIP9.9□□□□□ -0.82
SF3B3-204ENST00000563739 APOL2Q9BQE5 337 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 MCCC2Q9HCC0 563 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 SEMA3GQ9NS98 782 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 CUTCQ9NTM9 273 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 PTGFRNQ9P2B2 879 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 SUCOQ9UBS9 1254 aaKnown RBP9.9□□□□□ -0.82
SF3B3-204ENST00000563739 PKP3Q9Y446 797 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 HEATR5BQ9P2D3 2071 aa9.9□□□□□ -0.82
SF3B3-204ENST00000563739 NBEAL1Q6ZS30 2694 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 TRAV17A0A0B4J275 112 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 KRT87PA6NCN2 255 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 SLC19A2O60779 497 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 WDPCPO95876 746 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 KRT1P04264 644 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 SERPING1P05155 500 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 ITGAMP11215 1152 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 ACRV1P26436 265 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 FANCCQ00597 558 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 RPA4Q13156 261 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 MPP3Q13368 585 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 KRT33BQ14525 404 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 NR1I3Q14994 352 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 PCOLCEQ15113 449 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 DBN1Q16643 649 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 FILIP1LQ4L180 1135 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 FRMPD2BQ6IN97 320 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 XKRXQ6PP77 449 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 ARHGEF18Q6ZSZ5 1173 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 GAS2L3Q86XJ1 694 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 RFX6Q8HWS3 928 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 VRK3Q8IV63 474 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 MCATQ8IVS2 390 aaKnown RBP9.89□□□□□ -0.83
SF3B3-204ENST00000563739 ARHGEF39Q8N4T4 335 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 OR5K2Q8NHB8 316 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 STT3BQ8TCJ2 826 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 LKAAEAR1Q8TD35 194 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 NRGNQ92686 78 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 SYN2Q92777 582 aaPredicted RBP9.89□□□□□ -0.83
SF3B3-204ENST00000563739 DNAJC1Q96KC8 554 aaKnown RBP9.89□□□□□ -0.83
SF3B3-204ENST00000563739 IL17FQ96PD4 163 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 COPS8Q99627 209 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 NPAS2Q99743 824 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms