RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 CFAP20Q9Y6A4 193 aaKnown RBP17.54■□□□□ 0.4
COMMD4-208ENST00000563220 KLHL33A6NCF5 533 aa17.53■□□□□ 0.4
COMMD4-208ENST00000563220 GSC2O15499 205 aa17.53■□□□□ 0.4
COMMD4-208ENST00000563220 ATP6V1G2O95670 118 aa17.53■□□□□ 0.4
COMMD4-208ENST00000563220 IGHV4-34P06331 123 aa17.53■□□□□ 0.4
COMMD4-208ENST00000563220 CLCNKAP51800 687 aa17.53■□□□□ 0.4
COMMD4-208ENST00000563220 KIAA1024LP59773 190 aa17.53■□□□□ 0.4
COMMD4-208ENST00000563220 SQLEQ14534 574 aa17.53■□□□□ 0.4
COMMD4-208ENST00000563220 GCNT7Q6ZNI0 430 aa17.53■□□□□ 0.4
COMMD4-208ENST00000563220 GALNT13Q8IUC8 556 aa17.53■□□□□ 0.4
COMMD4-208ENST00000563220 CHCHD4Q8N4Q1 142 aa17.53■□□□□ 0.4
COMMD4-208ENST00000563220 SHDQ96IW2 340 aa17.53■□□□□ 0.4
COMMD4-208ENST00000563220 TIMM29Q9BSF4 260 aa17.53■□□□□ 0.4
COMMD4-208ENST00000563220 WSB2Q9NYS7 404 aaPredicted RBP17.53■□□□□ 0.4
COMMD4-208ENST00000563220 KLQ9UEF7 1012 aa17.53■□□□□ 0.4
COMMD4-208ENST00000563220 ZFC3H1O60293 1989 aaKnown RBP17.53■□□□□ 0.4
COMMD4-208ENST00000563220 KCNE1BA0A087WTH5 132 aa17.52■□□□□ 0.4
COMMD4-208ENST00000563220 PRR19A6NJB7 356 aa17.52■□□□□ 0.4
COMMD4-208ENST00000563220 MEI4A8MW99 385 aa17.52■□□□□ 0.4
COMMD4-208ENST00000563220 THRAP10827 490 aa17.52■□□□□ 0.4
COMMD4-208ENST00000563220 CPOXP36551 454 aa17.52■□□□□ 0.4
COMMD4-208ENST00000563220 GNPDA1P46926 289 aa17.52■□□□□ 0.4
COMMD4-208ENST00000563220 PTK2BQ14289 1009 aa17.52■□□□□ 0.4
COMMD4-208ENST00000563220 NFATC4Q14934 902 aa17.52■□□□□ 0.4
COMMD4-208ENST00000563220 CPSF6Q16630 551 aaKnown RBP eCLIP17.52■□□□□ 0.4
COMMD4-208ENST00000563220 CAPRIN2Q6IMN6 1127 aaKnown RBP17.52■□□□□ 0.4
COMMD4-208ENST00000563220 OGFOD2Q6N063 350 aa17.52■□□□□ 0.4
COMMD4-208ENST00000563220 ENPP7Q6UWV6 458 aa17.52■□□□□ 0.4
COMMD4-208ENST00000563220 SNX32Q86XE0 403 aa17.52■□□□□ 0.4
COMMD4-208ENST00000563220 L3MBTL4Q8NA19 623 aa17.52■□□□□ 0.4
COMMD4-208ENST00000563220 RP9Q8TA86 221 aaKnown RBP17.52■□□□□ 0.4
COMMD4-208ENST00000563220 RLN3Q8WXF3 142 aa17.52■□□□□ 0.4
COMMD4-208ENST00000563220 PFDN4Q9NQP4 134 aa17.52■□□□□ 0.4
COMMD4-208ENST00000563220 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.52■□□□□ 0.4
COMMD4-208ENST00000563220 ACSL5Q9ULC5 683 aa17.52■□□□□ 0.4
COMMD4-208ENST00000563220 CCL27Q9Y4X3 112 aa17.52■□□□□ 0.4
COMMD4-208ENST00000563220 PRSS38A1L453 326 aa17.52■□□□□ 0.39
COMMD4-208ENST00000563220 MANBAO00462 879 aa17.52■□□□□ 0.39
COMMD4-208ENST00000563220 ULK1O75385 1050 aa17.52■□□□□ 0.39
COMMD4-208ENST00000563220 WFS1O76024 890 aa17.52■□□□□ 0.39
COMMD4-208ENST00000563220 ATP4BP51164 291 aa17.52■□□□□ 0.39
COMMD4-208ENST00000563220 CYLC2Q14093 348 aaPredicted RBP17.52■□□□□ 0.39
COMMD4-208ENST00000563220 FASTKQ14296 549 aaKnown RBP17.52■□□□□ 0.39
COMMD4-208ENST00000563220 GGTA1PQ4G0N0 100 aa17.52■□□□□ 0.39
COMMD4-208ENST00000563220 C6orf136Q5SQH8 315 aa17.52■□□□□ 0.39
COMMD4-208ENST00000563220 WLSQ5T9L3 541 aa17.52■□□□□ 0.39
COMMD4-208ENST00000563220 LRRC56Q8IYG6 542 aaPredicted RBP17.52■□□□□ 0.39
COMMD4-208ENST00000563220 SYTL1Q8IYJ3 562 aa17.52■□□□□ 0.39
COMMD4-208ENST00000563220 TMEM145Q8NBT3 493 aa17.52■□□□□ 0.39
COMMD4-208ENST00000563220 OR1E3Q8WZA6 343 aa17.52■□□□□ 0.39
COMMD4-208ENST00000563220 SLC29A3Q9BZD2 475 aa17.52■□□□□ 0.39
COMMD4-208ENST00000563220 TPSD1Q9BZJ3 242 aa17.52■□□□□ 0.39
COMMD4-208ENST00000563220 C1orf21Q9H246 121 aa17.52■□□□□ 0.39
COMMD4-208ENST00000563220 OSGEPL1Q9H4B0 414 aa17.52■□□□□ 0.39
COMMD4-208ENST00000563220 RIC8BQ9NVN3 520 aa17.52■□□□□ 0.39
COMMD4-208ENST00000563220 PLAGL1Q9UM63 463 aa17.52■□□□□ 0.39
COMMD4-208ENST00000563220 C19orf67A6NJJ6 358 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 E7ENX8 843 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 PSMD12O00232 456 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-208ENST00000563220 IFRD1O00458 451 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-208ENST00000563220 GPX3P22352 226 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 AKT2P31751 481 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 DIO3P55073 304 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 SLC25A3Q00325 362 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 TAP2Q03519 686 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 CHIT1Q13231 466 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 PRKG2Q13237 762 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 HERC3Q15034 1050 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 SGO1Q5FBB7 561 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 KIAA0895LQ68EN5 471 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 PAOXQ6QHF9 649 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 GK5Q6ZS86 529 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 OR9I1Q8NGQ6 314 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 USP7Q93009 1102 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 MTFMTQ96DP5 389 aaKnown RBP17.51■□□□□ 0.39
COMMD4-208ENST00000563220 IL17FQ96PD4 163 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 INSM2Q96T92 566 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-208ENST00000563220 NRTNQ99748 197 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 GPR174Q9BXC1 333 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 CARS2Q9HA77 564 aaKnown RBP17.51■□□□□ 0.39
COMMD4-208ENST00000563220 ZNF490Q9ULM2 529 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-208ENST00000563220 PNMA8BQ9ULN7 279 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-208ENST00000563220 HS3ST3A1Q9Y663 406 aa17.51■□□□□ 0.39
COMMD4-208ENST00000563220 E7EQ34 232 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 APBB3O95704 486 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 CD22P20273 847 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 CD6P30203 668 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 HALP42357 657 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 CCR5P51681 352 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 MXRA7P84157 204 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 AGKQ53H12 422 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 RNF165Q6ZSG1 346 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 SPATA19Q7Z5L4 167 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 DCUN1D3Q8IWE4 304 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 FAM160A2Q8N612 972 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-208ENST00000563220 OR5K2Q8NHB8 316 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 MAFAQ8NHW3 353 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-208ENST00000563220 RAD51AP1Q96B01 352 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 BIRC7Q96CA5 298 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 PDXPQ96GD0 296 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms