RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 OSBPL9Q96SU4 736 aa16.24■□□□□ 0.19
CLK3-210ENST00000563112 SPRTNQ9H040 489 aaPredicted RBP16.24■□□□□ 0.19
CLK3-210ENST00000563112 CIDEBQ9UHD4 219 aa16.24■□□□□ 0.19
CLK3-210ENST00000563112 PADI2Q9Y2J8 665 aa16.24■□□□□ 0.19
CLK3-210ENST00000563112 CRYL1Q9Y2S2 319 aa16.24■□□□□ 0.19
CLK3-210ENST00000563112 E5RI56 91 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 GOLGA8MH3BSY2 632 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 PHF2O75151 1096 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 TMEM63AO94886 807 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 FKBP9O95302 570 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 PEBP1P30086 187 aaKnown RBP16.23■□□□□ 0.19
CLK3-210ENST00000563112 FNTAP49354 379 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 ADARP55265 1226 aaKnown RBP16.23■□□□□ 0.19
CLK3-210ENST00000563112 GRB7Q14451 532 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 SF1Q15637 639 aaKnown RBP16.23■□□□□ 0.19
CLK3-210ENST00000563112 DEFB110Q30KQ9 67 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 ANKRD20A4Q4UJ75 823 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 LCN10Q6JVE6 187 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 TCTN3Q6NUS6 607 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 DNAJC22Q8N4W6 341 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 C2orf73Q8N5S3 287 aaPredicted RBP16.23■□□□□ 0.19
CLK3-210ENST00000563112 LINC01555Q8NAE3 123 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 COG1Q8WTW3 980 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 ANP32BQ92688 251 aaKnown RBP16.23■□□□□ 0.19
CLK3-210ENST00000563112 ZNF669Q96BR6 464 aaPredicted RBP16.23■□□□□ 0.19
CLK3-210ENST00000563112 BIRC8Q96P09 236 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 IL17FQ96PD4 163 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 DHRS4Q9BTZ2 278 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 TRIM4Q9C037 500 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 TXLNGQ9NUQ3 528 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 INTS10Q9NVR2 710 aaKnown RBP16.23■□□□□ 0.19
CLK3-210ENST00000563112 GPN3Q9UHW5 284 aaPredicted RBP16.23■□□□□ 0.19
CLK3-210ENST00000563112 TLK1Q9UKI8 766 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 TCFL5Q9UL49 500 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 SRPK3Q9UPE1 567 aa16.23■□□□□ 0.19
CLK3-210ENST00000563112 CTAGE9A4FU28 777 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 PYCARD-AS1I3L0S3 204 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 CES2O00748 559 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 ZSCAN9O15535 394 aaPredicted RBP16.22■□□□□ 0.19
CLK3-210ENST00000563112 NIPSNAP2O75323 286 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 ZIC2O95409 532 aaPredicted RBP16.22■□□□□ 0.19
CLK3-210ENST00000563112 C1orf105O95561 183 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 CD63P08962 238 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 PKMP14618 531 aaKnown RBP16.22■□□□□ 0.19
CLK3-210ENST00000563112 MAGP20916 626 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 ATP5DP30049 168 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 GABRA4P48169 554 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 IL10RAQ13651 578 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 NCF4Q15080 339 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 PPP1R7Q15435 360 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 RHBDD2Q6NTF9 364 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 CNSTQ6PJW8 725 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 TAX1BP1Q86VP1 789 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 CILP2Q8IUL8 1156 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 PROKR1Q8TCW9 393 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 SERPINB12Q96P63 405 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 NDC1Q9BTX1 674 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 MENTQ9BUN1 341 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 CCDC68Q9H2F9 335 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 CLMPQ9H6B4 373 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 ACSS2Q9NR19 701 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 TRMT1Q9NXH9 659 aaKnown RBP16.22■□□□□ 0.19
CLK3-210ENST00000563112 EURLQ9NYK6 297 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 SNX12Q9UMY4 172 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 TP53TG5Q9Y2B4 290 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 NFS1Q9Y697 457 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 MAD1L1Q9Y6D9 718 aa16.22■□□□□ 0.19
CLK3-210ENST00000563112 SNRNP200O75643 2136 aaKnown RBP16.22■□□□□ 0.19
CLK3-210ENST00000563112 ARGFXA6NJG6 315 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 CAPN1P07384 714 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 CBSLP0DN79 551 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 CBSP35520 551 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 BDKRB1P46663 353 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 CSRP3P50461 194 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 DCDP81605 110 aaKnown RBP16.21■□□□□ 0.19
CLK3-210ENST00000563112 KLRB1Q12918 225 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 ZC3H12BQ5HYM0 836 aaKnown RBP16.21■□□□□ 0.19
CLK3-210ENST00000563112 MLIPQ5VWP3 458 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 ZNF470Q6ECI4 717 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 FIGLAQ6QHK4 219 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 FAM198BQ6UWH4 519 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 ASB18Q6ZVZ8 466 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 CENPUQ71F23 418 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 FAM20CQ8IXL6 584 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 LMNTD2Q8IXW0 634 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 PPIL6Q8IXY8 311 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 ZBTB2Q8N680 514 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 ZNF655Q8N720 491 aaPredicted RBP16.21■□□□□ 0.19
CLK3-210ENST00000563112 CALML6Q8TD86 181 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 DENND1AQ8TEH3 1009 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 DLG3Q92796 817 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 NDOR1Q9UHB4 597 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 KLHL20Q9Y2M5 609 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 NEU2Q9Y3R4 380 aa16.21■□□□□ 0.19
CLK3-210ENST00000563112 SETXQ7Z333 2677 aaKnown RBP16.21■□□□□ 0.18
CLK3-210ENST00000563112 H3BMH7 237 aa16.2■□□□□ 0.18
CLK3-210ENST00000563112 HCRTR1O43613 425 aa16.2■□□□□ 0.18
CLK3-210ENST00000563112 CASRP41180 1078 aa16.2■□□□□ 0.18
CLK3-210ENST00000563112 CCL11P51671 97 aa16.2■□□□□ 0.18
CLK3-210ENST00000563112 TLE1Q04724 770 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms