RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 LKAAEAR1Q8TD35 194 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 HCAR2Q8TDS4 363 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 VOPP1Q96AW1 172 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 KCTD12Q96CX2 325 aaKnown RBP11.34□□□□□ -0.59
PCAT1-202ENST00000561978 LRIG1Q96JA1 1093 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 CDK15Q96Q40 435 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 PKP2Q99959 881 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 TRPS1Q9UHF7 1281 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 FBXO10Q9UK96 956 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 ANKRD12Q6UB98 2062 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 STK16O75716 305 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 APODP05090 189 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 HIST1H2AGP0C0S8 130 aaPredicted RBP11.34□□□□□ -0.59
PCAT1-202ENST00000561978 PIM1P11309 404 aaPredicted RBP11.34□□□□□ -0.59
PCAT1-202ENST00000561978 ZNF24P17028 368 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 HIST1H2ADP20671 130 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 SLC6A2P23975 617 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 AVPR2P30518 371 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 RPIAP49247 311 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 ATXN3P54252 364 aaPredicted RBP11.34□□□□□ -0.59
PCAT1-202ENST00000561978 UFM1P61960 85 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 TRAF3Q13114 568 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 INPP5AQ14642 412 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 NR6A1Q15406 480 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 AASDHQ4L235 1098 aaPredicted RBP11.34□□□□□ -0.59
PCAT1-202ENST00000561978 C6orf10Q5SRN2 563 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 PLEKHS1Q5SXH7 462 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 IL23RQ5VWK5 629 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 SCIMPQ6UWF3 145 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 ADIPOR2Q86V24 386 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 TICAM1Q8IUC6 712 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 TMEM102Q8N9M5 508 aaPredicted RBP11.34□□□□□ -0.59
PCAT1-202ENST00000561978 OR2A12Q8NGT7 310 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 HIST1H2AHQ96KK5 128 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 HIST1H2AJQ99878 128 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 H2AFJQ9BTM1 129 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 IL1RL2Q9HB29 575 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 ARMC1Q9NVT9 282 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 SMOXQ9NWM0 555 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 C2orf42Q9NWW7 574 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 ACTR3BQ9P1U1 418 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 B4GALT6Q9UBX8 382 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 TSR3Q9UJK0 312 aaKnown RBP11.34□□□□□ -0.59
PCAT1-202ENST00000561978 ERVW-1Q9UQF0 538 aa11.34□□□□□ -0.59
PCAT1-202ENST00000561978 EIF3LQ9Y262 564 aaKnown RBP11.34□□□□□ -0.59
PCAT1-202ENST00000561978 LAMA1P25391 3075 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 KMT2EQ8IZD2 1858 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 QSOX1O00391 747 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 NME4O00746 187 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 LSM1O15116 133 aaKnown RBP11.33□□□□□ -0.6
PCAT1-202ENST00000561978 SLC16A5O15375 505 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 ZSCAN9O15535 394 aaPredicted RBP11.33□□□□□ -0.6
PCAT1-202ENST00000561978 ULK1O75385 1050 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 RNASEH2AO75792 299 aaKnown RBP11.33□□□□□ -0.6
PCAT1-202ENST00000561978 AP2A2O94973 939 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 MPC1LP0DKB6 136 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 ATP1B2P14415 290 aaPredicted RBP11.33□□□□□ -0.6
PCAT1-202ENST00000561978 IL10P22301 178 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 LHCGRP22888 699 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 AOAHP28039 575 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 VIPR1P32241 457 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 GGT5P36269 586 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 HNMTP50135 292 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 DCDC1P59894 354 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 MTAPQ13126 283 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 AP5B1Q2VPB7 878 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 TMEM215Q68D42 235 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 Q6ZVU0 165 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 ZFAND4Q86XD8 727 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 LILRA2Q8N149 483 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 SFRP1Q8N474 314 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 RPLP0P6Q8NHW5 317 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 SORCS1Q8WY21 1168 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 EME1Q96AY2 570 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 CLDN23Q96B33 292 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 ERLEC1Q96DZ1 483 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 MAGEB10Q96LZ2 347 aaPredicted RBP11.33□□□□□ -0.6
PCAT1-202ENST00000561978 SLC39A3Q9BRY0 314 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 SLC29A3Q9BZD2 475 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 OSBPL6Q9BZF3 934 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 FAM83DQ9H4H8 585 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 SLC32A1Q9H598 525 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 ELOVL2Q9NXB9 296 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 SLC27A6Q9Y2P4 619 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 PCDHA9Q9Y5H5 950 aa11.33□□□□□ -0.6
PCAT1-202ENST00000561978 GON4LQ3T8J9 2241 aa11.32□□□□□ -0.6
PCAT1-202ENST00000561978 EIF4E1BA6NMX2 242 aaKnown RBP11.32□□□□□ -0.6
PCAT1-202ENST00000561978 FXYD1O00168 92 aa11.32□□□□□ -0.6
PCAT1-202ENST00000561978 TXNDC9O14530 226 aa11.32□□□□□ -0.6
PCAT1-202ENST00000561978 HNRNPRO43390 633 aaKnown RBP11.32□□□□□ -0.6
PCAT1-202ENST00000561978 NUAK1O60285 661 aa11.32□□□□□ -0.6
PCAT1-202ENST00000561978 DNAJA2O60884 412 aa11.32□□□□□ -0.6
PCAT1-202ENST00000561978 ASLP04424 464 aa11.32□□□□□ -0.6
PCAT1-202ENST00000561978 SRPRAP08240 638 aaKnown RBP11.32□□□□□ -0.6
PCAT1-202ENST00000561978 C1SP09871 688 aa11.32□□□□□ -0.6
PCAT1-202ENST00000561978 UBTFL6P0CB48 400 aaPredicted RBP11.32□□□□□ -0.6
PCAT1-202ENST00000561978 CCR7P32248 378 aa11.32□□□□□ -0.6
PCAT1-202ENST00000561978 EEFSECP57772 596 aaKnown RBP11.32□□□□□ -0.6
PCAT1-202ENST00000561978 SP140Q13342 867 aa11.32□□□□□ -0.6
PCAT1-202ENST00000561978 LRRC32Q14392 662 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms