RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 ALAS2P22557 587 aa11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 ITGA3P26006 1051 aa11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 PEBP1P30086 187 aaKnown RBP11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 TSFMP43897 325 aaKnown RBP11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 PER3P56645 1201 aa11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 FOXL2P58012 376 aa11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 TBX2Q13207 712 aaPredicted RBP11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 AGAP7PQ5VUJ5 663 aa11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 YOD1Q5VVQ6 348 aaPredicted RBP11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 PRAMEF13Q5VWM6 474 aa11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 B3GNTL1Q67FW5 361 aaPredicted RBP11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 MICALCLQ6ZW33 695 aa11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 TMEM151BQ8IW70 566 aa11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 AGAP4Q96P64 663 aa11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 SLC26A1Q9H2B4 701 aa11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 MRM3Q9HC36 420 aaKnown RBP11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 SLC6A20Q9NP91 592 aa11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 LUC7LQ9NQ29 371 aaKnown RBP11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 ENAMQ9NRM1 1142 aa11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 FBXL4Q9UKA2 621 aa11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 PCDHA13Q9Y5I0 950 aa11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 CSAG2Q9Y5P2 127 aa11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 ITPR2Q14571 2701 aa11.37□□□□□ -0.59
CARMIL3-204ENST00000561354 NUP210LQ5VU65 1888 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 CCDC78A2IDD5 438 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 MROH6A6NGR9 719 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 E2F3O00716 465 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 SOCS6O14544 535 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 TJP3O95049 919 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 OR56A5P0C7T3 313 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 ITGAXP20702 1163 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 MAGP20916 626 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 TNFRSF8P28908 595 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 CETN2P41208 172 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 RAB28P51157 221 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 BRD3Q15059 726 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 NKG7Q16617 165 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 HIF1AQ16665 826 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 IRAK1BP1Q5VVH5 260 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 KIRREL2Q6UWL6 708 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 TTLL10Q6ZVT0 673 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 MCATQ8IVS2 390 aaKnown RBP11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 DNAJB14Q8TBM8 379 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 GRHL3Q8TE85 626 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 FAR1Q8WVX9 515 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 SLC22A18Q96BI1 424 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 VPS50Q96JG6 964 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 CALR3Q96L12 384 aaKnown RBP11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 ALS2CR12Q96Q35 445 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 SPSB2Q99619 263 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 FAM118BQ9BPY3 351 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 MENTQ9BUN1 341 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 LRRC40Q9H9A6 602 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 CDC23Q9UJX2 597 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 NXT1Q9UKK6 140 aaKnown RBP11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 TFR2Q9UP52 801 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 HS3ST3B1Q9Y662 390 aa11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 MDC1Q14676 2089 aaKnown RBP11.36□□□□□ -0.59
CARMIL3-204ENST00000561354 F8W8V4 182 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 DSCR3O14972 297 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 PSMD3O43242 534 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 LRRTM2O43300 516 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 HNRNPRO43390 633 aaKnown RBP11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 METTL18O95568 372 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 CD9P21926 228 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 PKLRP30613 574 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 FOXN2P32314 431 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 RWDD2BP57060 319 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 GRM7Q14831 915 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 POU6F1Q14863 301 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 ZNF169Q14929 603 aaPredicted RBP11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 TLR1Q15399 786 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 SPA17Q15506 151 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 ZRSR2Q15696 482 aaKnown RBP11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 P3H1Q32P28 736 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 SYTL3Q4VX76 610 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 DNAJC21Q5F1R6 531 aaKnown RBP11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 ZC3H12BQ5HYM0 836 aaKnown RBP11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 TCTE1Q5JU00 501 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 FCRL6Q6DN72 434 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 ARHGEF18Q6ZSZ5 1173 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 COX15Q7KZN9 410 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 CCDC170Q8IYT3 715 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 SLC22A15Q8IZD6 547 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 LINC01555Q8NAE3 123 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 ZNF285Q96NJ3 590 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 PANX2Q96RD6 677 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 LHPPQ9H008 270 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 SEMA3GQ9NS98 782 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 INTS7Q9NVH2 962 aaKnown RBP11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 IL1RAPL1Q9NZN1 696 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 PLAGL1Q9UM63 463 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 ENTPD4Q9Y227 616 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 OSGIN2Q9Y236 505 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 DOCK10Q96BY6 2186 aa11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 SNRNP200O75643 2136 aaKnown RBP11.35□□□□□ -0.59
CARMIL3-204ENST00000561354 CCDC162PA2VCL2 907 aa11.34□□□□□ -0.59
CARMIL3-204ENST00000561354 GOLGA6L9A6NEM1 432 aa11.34□□□□□ -0.59
CARMIL3-204ENST00000561354 VSTM2BA6NLU5 285 aa11.34□□□□□ -0.59
CARMIL3-204ENST00000561354 FKBP9O95302 570 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms