RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 CCDC88CQ9P219 2028 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 TPRP12270 2363 aaKnown RBP9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 ACACBO00763 2458 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 ACACAQ13085 2346 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 EXOC1LA0A1B0GW35 172 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 A0A1W2PPV9 198 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 TRABD2BA6NFA1 517 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 ZNF839A8K0R7 811 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 B4E171 279 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 POC1B-GALNT4F8VUJ3 575 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 PLD2O14939 933 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 SLC16A8O95907 504 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 ALDOAP04075 364 aaKnown RBP9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 CCDC166P0CW27 439 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 NELFEP18615 380 aaKnown RBP9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 SPINK2P20155 84 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 CYP2A7P20853 494 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 SAT1P21673 171 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 MAP4P27816 1152 aaKnown RBP9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 PEBP1P30086 187 aaKnown RBP9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 TSPAN7P41732 249 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 MSH2P43246 934 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 BDKRB1P46663 353 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 ATP6V0D1P61421 351 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 PPP1CAP62136 330 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 MC2RQ01718 297 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 ZNF460Q14592 562 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 PPP1R3AQ16821 1122 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 SLC5A12Q1EHB4 618 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 CDKL4Q5MAI5 379 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 PHF19Q5T6S3 580 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 LGSNQ5TDP6 509 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 MROH9Q5TGP6 573 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 CACHD1Q5VU97 1274 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 ARMC6Q6NXE6 501 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 IRGCQ6NXR0 463 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 SPESP1Q6UW49 350 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 TIFABQ6ZNK6 161 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 TAOK1Q7L7X3 1001 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 TDRPQ86YL5 185 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 LSMEM2Q8N112 164 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 D2HGDHQ8N465 521 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 BMPERQ8N8U9 685 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 OR2A1Q8NGT9 310 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 ZNF480Q8WV37 535 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 MTBPQ96DY7 904 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 CCDC138Q96M89 665 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 SLC46A1Q96NT5 459 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 PKP4Q99569 1192 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 MAP3K3Q99759 626 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 CCDC77Q9BR77 488 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 TRIM54Q9BYV2 358 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 CAB39LQ9H9S4 337 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 FBXO8Q9NRD0 319 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 SIDT1Q9NXL6 827 aaKnown RBP9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 SPHK1Q9NYA1 384 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 AKAP7Q9P0M2 348 aaPredicted RBP9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 ADAMTS6Q9UKP5 1117 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 SATB2Q9UPW6 733 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 BTRCQ9Y297 605 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 ACOT9Q9Y305 439 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 KLK4Q9Y5K2 254 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 V9GYY5 206 aaPredicted RBP9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 WDFY3Q8IZQ1 3526 aa9.31□□□□□ -0.92
RABGGTA-221ENST00000561055 A0A087X1B8 175 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 IGHV5-51A0A0C4DH38 117 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 A8MU76 341 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 CDRT15L2A8MXV6 281 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 E7ENX8 843 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 PHGDHO43175 533 aaKnown RBP9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 KIF1CO43896 1103 aaKnown RBP9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 KRT37O76014 449 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 ZBTB11O95625 1053 aaPredicted RBP9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 C2P06681 752 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 SNRPAP09012 282 aaKnown RBP9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 NUDT17P0C025 328 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 HIST1H2AGP0C0S8 130 aaPredicted RBP9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 FGF3P11487 239 aaPredicted RBP9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 COL6A2P12110 1019 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 CD1DP15813 335 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 UGT2B7P16662 529 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 HIST1H2ADP20671 130 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 MPSTP25325 297 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 OAS2P29728 719 aaKnown RBP9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 CSTF2P33240 577 aaKnown RBP eCLIP9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 HSD17B3P37058 310 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 SERPINB8P50452 374 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 PNLIPRP1P54315 467 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 HSD11B2P80365 405 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 TAP2Q03519 686 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 PHKG1Q16816 387 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 FAM92BQ6ZTR7 304 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 CMC1Q7Z7K0 106 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 ADAMTSL2Q86TH1 951 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 ISCA2Q86U28 154 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 BPHLQ86WA6 291 aaPredicted RBP9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 MARCH9Q86YJ5 346 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 FBXO39Q8N4B4 442 aa9.3□□□□□ -0.92
RABGGTA-221ENST00000561055 LMNTD1Q8N9Z9 388 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms