RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 MRGPREQ86SM8 312 aa15.61■□□□□ 0.09
SNX1-213ENST00000561026 DCUN1D3Q8IWE4 304 aa15.61■□□□□ 0.09
SNX1-213ENST00000561026 SLC22A18Q96BI1 424 aa15.61■□□□□ 0.09
SNX1-213ENST00000561026 SMAD5Q99717 465 aaKnown RBP15.61■□□□□ 0.09
SNX1-213ENST00000561026 NDC1Q9BTX1 674 aa15.61■□□□□ 0.09
SNX1-213ENST00000561026 TREX1Q9NSU2 369 aa15.61■□□□□ 0.09
SNX1-213ENST00000561026 TXLNGQ9NUQ3 528 aa15.61■□□□□ 0.09
SNX1-213ENST00000561026 IRAK4Q9NWZ3 460 aa15.61■□□□□ 0.09
SNX1-213ENST00000561026 EURLQ9NYK6 297 aa15.61■□□□□ 0.09
SNX1-213ENST00000561026 GPR83Q9NYM4 423 aa15.61■□□□□ 0.09
SNX1-213ENST00000561026 IFT80Q9P2H3 777 aaPredicted RBP15.61■□□□□ 0.09
SNX1-213ENST00000561026 KLHL20Q9Y2M5 609 aa15.61■□□□□ 0.09
SNX1-213ENST00000561026 PTRH2Q9Y3E5 179 aaKnown RBP15.61■□□□□ 0.09
SNX1-213ENST00000561026 MAP4K5Q9Y4K4 846 aa15.61■□□□□ 0.09
SNX1-213ENST00000561026 GOLGA6L6A8MZA4 724 aa15.6■□□□□ 0.09
SNX1-213ENST00000561026 S1PR4O95977 384 aa15.6■□□□□ 0.09
SNX1-213ENST00000561026 FOLR3P41439 243 aa15.6■□□□□ 0.09
SNX1-213ENST00000561026 UQCRFS1P47985 274 aa15.6■□□□□ 0.09
SNX1-213ENST00000561026 CRADDP78560 199 aa15.6■□□□□ 0.09
SNX1-213ENST00000561026 NKAIN1Q4KMZ8 207 aa15.6■□□□□ 0.09
SNX1-213ENST00000561026 PTRHD1Q6GMV3 140 aaKnown RBP15.6■□□□□ 0.09
SNX1-213ENST00000561026 MRPL14Q6P1L8 145 aaKnown RBP15.6■□□□□ 0.09
SNX1-213ENST00000561026 C4orf22Q6V702 233 aa15.6■□□□□ 0.09
SNX1-213ENST00000561026 MCATQ8IVS2 390 aaKnown RBP15.6■□□□□ 0.09
SNX1-213ENST00000561026 C2orf73Q8N5S3 287 aaPredicted RBP15.6■□□□□ 0.09
SNX1-213ENST00000561026 LMNTD1Q8N9Z9 388 aa15.6■□□□□ 0.09
SNX1-213ENST00000561026 OR2Y1Q8NGV0 311 aa15.6■□□□□ 0.09
SNX1-213ENST00000561026 OR2L8Q8NGY9 312 aa15.6■□□□□ 0.09
SNX1-213ENST00000561026 FER1L6-AS2Q96M78 137 aa15.6■□□□□ 0.09
SNX1-213ENST00000561026 IL17FQ96PD4 163 aa15.6■□□□□ 0.09
SNX1-213ENST00000561026 PSMG3-AS1Q96PY0 264 aa15.6■□□□□ 0.09
SNX1-213ENST00000561026 IL22Q9GZX6 179 aa15.6■□□□□ 0.09
SNX1-213ENST00000561026 P2RY12Q9H244 342 aa15.6■□□□□ 0.09
SNX1-213ENST00000561026 NDOR1Q9UHB4 597 aa15.6■□□□□ 0.09
SNX1-213ENST00000561026 CIDEBQ9UHD4 219 aa15.6■□□□□ 0.09
SNX1-213ENST00000561026 FER1L5A0AVI2 2057 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 PCSK5Q92824 1860 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 SPTAN1Q13813 2472 aaKnown RBP15.59■□□□□ 0.09
SNX1-213ENST00000561026 AP3B1O00203 1094 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 CNOT3O75175 753 aaKnown RBP15.59■□□□□ 0.09
SNX1-213ENST00000561026 ATXN8OSP0DMR3 200 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 GNLYP22749 145 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 GCGRP47871 477 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 NPY2RP49146 381 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 TMED2Q15363 201 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 DCAF10Q5QP82 559 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 LRRC6Q86X45 466 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 MPP5Q8N3R9 675 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 RBMXL3Q8N7X1 1067 aaKnown RBP15.59■□□□□ 0.09
SNX1-213ENST00000561026 PTERQ96BW5 349 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 PANX3Q96QZ0 392 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 MFRPQ9BY79 579 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 SLC22A11Q9NSA0 550 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 BFARQ9NZS9 450 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 C5AR2Q9P296 337 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 GNPTGQ9UJJ9 305 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 SLC39A10Q9ULF5 831 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 ZKSCAN5Q9Y2L8 839 aa15.59■□□□□ 0.09
SNX1-213ENST00000561026 SNRNP200O75643 2136 aaKnown RBP15.58■□□□□ 0.09
SNX1-213ENST00000561026 PEX12O00623 359 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 RASGRF2O14827 1237 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 KPNA5O15131 536 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 NDUFS3O75489 264 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 IGHEP01854 428 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 ALAS2P22557 587 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 RPS3P23396 243 aaKnown RBP eCLIP15.58■□□□□ 0.08
SNX1-213ENST00000561026 NMBRP28336 390 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 BASP1P80723 227 aaKnown RBP15.58■□□□□ 0.08
SNX1-213ENST00000561026 RAPSNQ13702 412 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 SLC9A5Q14940 896 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 SF1Q15637 639 aaKnown RBP15.58■□□□□ 0.08
SNX1-213ENST00000561026 INPP5JQ15735 1006 aaPredicted RBP15.58■□□□□ 0.08
SNX1-213ENST00000561026 VWA5B1Q5TIE3 1220 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 SLC6A19Q695T7 634 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 TTC23LQ6PF05 361 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 GSTA5Q7RTV2 222 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 OTOAQ7RTW8 1153 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 TAX1BP1Q86VP1 789 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 Q8NA96 180 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 CLEC1AQ8NC01 280 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 GSDMBQ8TAX9 411 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 DENND1AQ8TEH3 1009 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 DLG3Q92796 817 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 PNPLA2Q96AD5 504 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 SLAMF7Q9NQ25 335 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 INTS7Q9NVH2 962 aaKnown RBP15.58■□□□□ 0.08
SNX1-213ENST00000561026 P4HTMQ9NXG6 502 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 LUZP4Q9P127 313 aa15.58■□□□□ 0.08
SNX1-213ENST00000561026 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.58■□□□□ 0.08
SNX1-213ENST00000561026 PRICKLE3O43900 615 aaPredicted RBP15.57■□□□□ 0.08
SNX1-213ENST00000561026 ONECUT2O95948 504 aa15.57■□□□□ 0.08
SNX1-213ENST00000561026 FGGP02679 453 aa15.57■□□□□ 0.08
SNX1-213ENST00000561026 UMODP07911 640 aa15.57■□□□□ 0.08
SNX1-213ENST00000561026 GP1BBP13224 206 aa15.57■□□□□ 0.08
SNX1-213ENST00000561026 ARNTP27540 789 aa15.57■□□□□ 0.08
SNX1-213ENST00000561026 GRIA3P42263 894 aa15.57■□□□□ 0.08
SNX1-213ENST00000561026 ARSFP54793 590 aa15.57■□□□□ 0.08
SNX1-213ENST00000561026 FOXL2P58012 376 aa15.57■□□□□ 0.08
SNX1-213ENST00000561026 ZC3H12BQ5HYM0 836 aaKnown RBP15.57■□□□□ 0.08
SNX1-213ENST00000561026 FCRL6Q6DN72 434 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms