RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 PARD3BQ8TEW8 1205 aa6.13□□□□□ -1.43
HERC1-208ENST00000560462 SMPDL3BQ92485 455 aa6.13□□□□□ -1.43
HERC1-208ENST00000560462 FBXW5Q969U6 566 aa6.13□□□□□ -1.43
HERC1-208ENST00000560462 Q96M66 194 aa6.13□□□□□ -1.43
HERC1-208ENST00000560462 ATG10Q9H0Y0 220 aa6.13□□□□□ -1.43
HERC1-208ENST00000560462 TNMDQ9H2S6 317 aa6.13□□□□□ -1.43
HERC1-208ENST00000560462 APOBEC3GQ9HC16 384 aaKnown RBP6.13□□□□□ -1.43
HERC1-208ENST00000560462 SYTL2Q9HCH5 934 aa6.13□□□□□ -1.43
HERC1-208ENST00000560462 SLC40A1Q9NP59 571 aa6.13□□□□□ -1.43
HERC1-208ENST00000560462 KLHL1Q9NR64 748 aa6.13□□□□□ -1.43
HERC1-208ENST00000560462 AGPAT3Q9NRZ7 376 aa6.13□□□□□ -1.43
HERC1-208ENST00000560462 POT1Q9NUX5 634 aa6.13□□□□□ -1.43
HERC1-208ENST00000560462 DDIT4Q9NX09 232 aa6.13□□□□□ -1.43
HERC1-208ENST00000560462 ZNF624Q9P2J8 865 aaPredicted RBP6.13□□□□□ -1.43
HERC1-208ENST00000560462 Q9UFV3 132 aa6.13□□□□□ -1.43
HERC1-208ENST00000560462 TMEFF2Q9UIK5 374 aaPredicted RBP6.13□□□□□ -1.43
HERC1-208ENST00000560462 INSIG1O15503 277 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 PFKFB2O60825 505 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 WFS1O76024 890 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 HLA-DRAP01903 254 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 RHOAP61586 193 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 IRX6P78412 446 aaPredicted RBP6.12□□□□□ -1.43
HERC1-208ENST00000560462 APBA1Q02410 837 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 GRM3Q14832 879 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 NKAIN1Q4KMZ8 207 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 SFRP5Q5T4F7 317 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 GPRC6AQ5T6X5 926 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 CDPF1Q6NVV7 123 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 CRTC3Q6UUV7 619 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 LRRC31Q6UY01 552 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 CARFQ8N187 725 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 FAM98AQ8NCA5 519 aaKnown RBP6.12□□□□□ -1.43
HERC1-208ENST00000560462 LINC01560Q8TB33 94 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 SLC22A8Q8TCC7 542 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 PROKR1Q8TCW9 393 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 SLC35F5Q8WV83 523 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 ZFPM2Q8WW38 1151 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 GCDHQ92947 438 aaPredicted RBP6.12□□□□□ -1.43
HERC1-208ENST00000560462 RNASE6Q93091 150 aaKnown RBP6.12□□□□□ -1.43
HERC1-208ENST00000560462 SNX21Q969T3 373 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 HSPBAP1Q96EW2 488 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 TRIM11Q96F44 468 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 ZNF641Q96N77 438 aaPredicted RBP6.12□□□□□ -1.43
HERC1-208ENST00000560462 PKP2Q99959 881 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 SH3GL2Q99962 352 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 ARPC5LQ9BPX5 153 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 TTYH2Q9BSA4 534 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 OSGEPL1Q9H4B0 414 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 RETREG1Q9H6L5 497 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 CISHQ9NSE2 258 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 C14orf119Q9NWQ9 140 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 OXSMQ9NWU1 459 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 HPCAL4Q9UM19 191 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 SIK3Q9Y2K2 1263 aa6.12□□□□□ -1.43
HERC1-208ENST00000560462 PCYT1BQ9Y5K3 369 aaPredicted RBP6.12□□□□□ -1.43
HERC1-208ENST00000560462 BUB1O43683 1085 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 TMCC1O94876 653 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 BMP10O95393 424 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 SERPINA7P05543 415 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 MSL3P1P0C860 447 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 TMIGD3P0DMS9 266 aaPredicted RBP6.11□□□□□ -1.43
HERC1-208ENST00000560462 IFNGR1P15260 489 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 PAX1P15863 534 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 PAMP19021 973 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 HOXD13P35453 343 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 ACVRL1P37023 503 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 GPR1P46091 355 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 ASCL1P50553 236 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 TOB1P50616 345 aaPredicted RBP6.11□□□□□ -1.43
HERC1-208ENST00000560462 ATP5J2P56134 94 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 ZNF33BQ06732 778 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 EMC4Q5J8M3 183 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 DENND2CQ68D51 928 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 RHBDD2Q6NTF9 364 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 FBXO38Q6PIJ6 1188 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 TRIM72Q6ZMU5 477 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 STRADAQ7RTN6 431 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 ARHGAP12Q8IWW6 846 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 DRC7Q8IY82 874 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 ELOA2Q8IYF1 753 aaPredicted RBP6.11□□□□□ -1.43
HERC1-208ENST00000560462 GPR135Q8IZ08 494 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 ZNF683Q8IZ20 524 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 PAF1Q8N7H5 531 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 ARIH2OSQ8N7S6 290 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 TMEM178AQ8NBL3 297 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 DNAJC19Q96DA6 116 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 CXorf40BQ96DE9 158 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 DTD2Q96FN9 168 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 FAM46AQ96IP4 442 aaKnown RBP6.11□□□□□ -1.43
HERC1-208ENST00000560462 AK8Q96MA6 479 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 HES7Q9BYE0 225 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 AKTIPQ9H8T0 292 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 UBTD1Q9HAC8 227 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 POPDC2Q9HBU9 364 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 PLCB1Q9NQ66 1216 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 MKS1Q9NXB0 559 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 DHCR7Q9UBM7 475 aaKnown RBP6.11□□□□□ -1.43
HERC1-208ENST00000560462 B4GALT7Q9UBV7 327 aa6.11□□□□□ -1.43
HERC1-208ENST00000560462 EIF3LQ9Y262 564 aaKnown RBP6.11□□□□□ -1.43
HERC1-208ENST00000560462 SPO11Q9Y5K1 396 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms