RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 CFAP61Q8NHU2 1237 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 ELMO2Q96JJ3 720 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 SLC46A1Q96NT5 459 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 TGM7Q96PF1 710 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 CAPS2Q9BXY5 557 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 CHRNA10Q9GZZ6 450 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 SMYD2Q9NRG4 433 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 ACSL6Q9UKU0 697 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 ICKQ9UPZ9 632 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 TDRKHQ9Y2W6 561 aaKnown RBP13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 PCDHB11Q9Y5F2 797 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 PCDHGA3Q9Y5H0 932 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 AK5Q9Y6K8 562 aa13.56□□□□□ -0.24
PKNOX1-209ENST00000560448 CCDC189A1A4V9 331 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 PABPN1LA6NDY0 278 aaKnown RBP13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 MYO1CO00159 1063 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 NVLO15381 856 aaKnown RBP13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 RASSF9O75901 435 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 ZBTB11O95625 1053 aaPredicted RBP13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 ENO2P09104 434 aaPredicted RBP13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 STMN1P16949 149 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 CYP2A7P20853 494 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 CNTFP26441 200 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 SLC26A3P40879 764 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 ATP1A2P50993 1020 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 CDKN2DP55273 166 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 GFERP55789 205 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 C16orf72Q14CZ0 275 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 TUBB8Q3ZCM7 444 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 CACHD1Q5VU97 1274 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 TAOK1Q7L7X3 1001 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 CLEC14AQ86T13 490 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 RASGRP3Q8IV61 690 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 CPNE9Q8IYJ1 553 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 ADGRF3Q8IZF5 1079 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 PPM1NQ8N819 430 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 OR9A1PQ8NGU1 263 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 MCOLN3Q8TDD5 553 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 FAM136AQ96C01 138 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 SLC41A2Q96JW4 573 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 SLC30A3Q99726 388 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 CCDC77Q9BR77 488 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 MENTQ9BUN1 341 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 DDA1Q9BW61 102 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 TRIM54Q9BYV2 358 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 PITPNM3Q9BZ71 974 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 ASPSCR1Q9BZE9 553 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 STMN4Q9H169 189 aaPredicted RBP13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 FBXO8Q9NRD0 319 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 SLC17A6Q9P2U8 582 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 GALPQ9UBC7 116 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 FETUBQ9UGM5 382 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 IKBKGQ9Y6K9 419 aa13.55□□□□□ -0.24
PKNOX1-209ENST00000560448 NCOR2Q9Y618 2525 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 GSAPA4D1B5 854 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 CXorf49A8MYA2 514 aaPredicted RBP13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 BTN3A1O00481 513 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 CDH16O75309 829 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 MPOP05164 745 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 CHRM5P08912 532 aaPredicted RBP13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 HIST1H2AGP0C0S8 130 aaPredicted RBP13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 ERGP11308 486 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 NELFEP18615 380 aaKnown RBP13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 HIST1H2ADP20671 130 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 PRDX3P30048 256 aaKnown RBP13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 HPDP32754 393 aaPredicted RBP13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 MDH1P40925 334 aaKnown RBP13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 SERPINB9P50453 376 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 AP1S2P56377 157 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 HSD11B2P80365 405 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 TIAL1Q01085 375 aaKnown RBP eCLIP13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 ACY1Q03154 408 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 IL11RAQ14626 422 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 RASA2Q15283 850 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 SLC5A12Q1EHB4 618 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 TBC1D25Q3MII6 688 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 TMTC4Q5T4D3 741 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 PAQR3Q6TCH7 311 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 CYHR1Q6ZMK1 362 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 EXOC3L1Q86VI1 746 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 CYP4X1Q8N118 509 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 RIBC1Q8N443 379 aaPredicted RBP13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 KDF1Q8NAX2 398 aaPredicted RBP13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 HIST1H2AHQ96KK5 128 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 FCRL4Q96PJ5 515 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 TAAR9Q96RI9 348 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 HIST1H2AJQ99878 128 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 H2AFJQ9BTM1 129 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 SLC12A9Q9BXP2 914 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 PPCSQ9HAB8 311 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 PARVBQ9HBI1 364 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 GPAMQ9HCL2 828 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 INTS7Q9NVH2 962 aaKnown RBP13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 ACTR10Q9NZ32 417 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 TMEM9Q9P0T7 183 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 CTNNAL1Q9UBT7 734 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 ZNF180Q9UJW8 692 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 BTRCQ9Y297 605 aa13.54□□□□□ -0.24
PKNOX1-209ENST00000560448 ARHGEF33A8MVX0 844 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 CDRT15L2A8MXV6 281 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms