RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 UBAP1Q9NZ09 502 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 GPRC5BQ9NZH0 403 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 IL36AQ9UHA7 158 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 CCL26Q9Y258 94 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 MYRFQ9Y2G1 1151 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 RNF11Q9Y3C5 154 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 MYOFQ9NZM1 2061 aa9.47□□□□□ -0.89
RTF1-206ENST00000560447 MUC22E2RYF6 1773 aaPredicted RBP9.47□□□□□ -0.89
RTF1-206ENST00000560447 CENPFP49454 3210 aa9.46□□□□□ -0.89
RTF1-206ENST00000560447 TRBV5-3A0A0A0MS03 114 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 A0A0U1RQS6 177 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 ARHGAP10A1A4S6 786 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 C7orf72A4D263 438 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 TRIM64CA6NLI5 447 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 FAM220BPB1ANY3 271 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 H0YAE9 185 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 INPP4BO15327 924 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 SEC22BO75396 215 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 PSIP1O75475 530 aaKnown RBP9.46□□□□□ -0.9
RTF1-206ENST00000560447 H6PDO95479 791 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 ADH1CP00326 375 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 CATP04040 527 aaKnown RBP9.46□□□□□ -0.9
RTF1-206ENST00000560447 PGRP06401 933 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 RETP07949 1114 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 JUPP14923 745 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 TIMP2P16035 220 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 MYF6P23409 242 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 MMP12P39900 470 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 CASP2P42575 452 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 TRPC1P48995 793 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 PRLHRP49683 370 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 ATXN3P54252 364 aaPredicted RBP9.46□□□□□ -0.9
RTF1-206ENST00000560447 ST8SIA6P61647 398 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 FPGSQ05932 587 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 ELP6Q0PNE2 266 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 MYBPC3Q14896 1274 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 EIF4HQ15056 248 aaKnown RBP9.46□□□□□ -0.9
RTF1-206ENST00000560447 C18orf21Q32NC0 220 aaPredicted RBP9.46□□□□□ -0.9
RTF1-206ENST00000560447 BCL7AQ4VC05 210 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 FAM98BQ52LJ0 330 aaKnown RBP9.46□□□□□ -0.9
RTF1-206ENST00000560447 RUNDC3AQ59EK9 446 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 RABL3Q5HYI8 236 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 LY6G5CQ5SRR4 150 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 C6orf52Q5T4I8 152 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 FOXB2Q5VYV0 432 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 PLPP4Q5VZY2 271 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 KRT80Q6KB66 452 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 SLC30A9Q6PML9 568 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 SLC2A7Q6PXP3 512 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 OTOP2Q7RTS6 562 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 TECPR1Q7Z6L1 1165 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 RIMKLAQ8IXN7 391 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 GALNT15Q8N3T1 639 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 LIX1Q8N485 282 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 CHST14Q8NCH0 376 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 ZFP28Q8NHY6 868 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 POF1BQ8WVV4 589 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 BTN2A2Q8WVV5 523 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 SELENOMQ8WWX9 145 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 HERVK_113Q902F9 699 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 BIRC7Q96CA5 298 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 ITCHQ96J02 903 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 ZNF514Q96K75 400 aaPredicted RBP9.46□□□□□ -0.9
RTF1-206ENST00000560447 CNBD2Q96M20 576 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 CCDC138Q96M89 665 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 CIB1Q99828 191 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 SPATA9Q9BWV2 254 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 MTIF3Q9H2K0 278 aaKnown RBP9.46□□□□□ -0.9
RTF1-206ENST00000560447 ELOVL6Q9H5J4 265 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 MAGIXQ9H6Y5 334 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 BRF2Q9HAW0 419 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 PCDH12Q9NPG4 1184 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 INTS7Q9NVH2 962 aaKnown RBP9.46□□□□□ -0.9
RTF1-206ENST00000560447 DUS2Q9NX74 493 aaKnown RBP9.46□□□□□ -0.9
RTF1-206ENST00000560447 EGFL7Q9UHF1 273 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 SLCO3A1Q9UIG8 710 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 TMPRSS11EQ9UL52 423 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 AURKCQ9UQB9 309 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 KIAA1549LQ6ZVL6 1849 aa9.46□□□□□ -0.9
RTF1-206ENST00000560447 TRIM64A6NGJ6 449 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 EIF4E1BA6NMX2 242 aaKnown RBP9.45□□□□□ -0.9
RTF1-206ENST00000560447 C16orf96A6NNT2 1141 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 HIDE1A8MVS5 230 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 H3BNH8 94 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 WNT9AO14904 365 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 SGTAO43765 313 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 ATG13O75143 517 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 LEFTY1O75610 366 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 CSPG5O95196 566 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 CISD3P0C7P0 127 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 BCKDHAP12694 445 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 CD46P15529 392 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 ZNF23P17027 643 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 EPORP19235 508 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 PRPS1L1P21108 318 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 HRH2P25021 359 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 MAP4P27816 1152 aaKnown RBP9.45□□□□□ -0.9
RTF1-206ENST00000560447 S100A3P33764 101 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 NRIP1P48552 1158 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 DGKGP49619 791 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms