RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 RORAP35398 523 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 MAGEA3P43357 314 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 TNNT3P45378 269 aaPredicted RBP9.01□□□□□ -0.97
SMAD3-215ENST00000560424 SPINT3P49223 89 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 VPS41P49754 854 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 CASP6P55212 293 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 EIF3BP55884 814 aaKnown RBP9.01□□□□□ -0.97
SMAD3-215ENST00000560424 AP1B1Q10567 949 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 PRKAA1Q13131 559 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 AIMP2Q13155 320 aaKnown RBP9.01□□□□□ -0.97
SMAD3-215ENST00000560424 GTF2H3Q13889 308 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 UAP1Q16222 522 aaPredicted RBP9.01□□□□□ -0.97
SMAD3-215ENST00000560424 ZNF648Q5T619 568 aaPredicted RBP9.01□□□□□ -0.97
SMAD3-215ENST00000560424 AGAP9Q5VTM2 703 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 AGAP7PQ5VUJ5 663 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 ITPRIPL1Q6GPH6 555 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 WASH2PQ6VEQ5 465 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 ARHGEF18Q6ZSZ5 1173 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 CENPUQ71F23 418 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 B4GALNT4Q76KP1 1039 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 CROCCP2Q86T23 111 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 PRUNE1Q86TP1 453 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 TRAPPC5Q8IUR0 188 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 CEP97Q8IW35 865 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 ZNF567Q8N184 647 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.01□□□□□ -0.97
SMAD3-215ENST00000560424 TEX26Q8N6G2 289 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 CCNYQ8ND76 341 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 LPCAT1Q8NF37 534 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 N4BP2L2Q92802 583 aaPredicted RBP9.01□□□□□ -0.97
SMAD3-215ENST00000560424 CCDC120Q96HB5 630 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 TEKT5Q96M29 485 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 TTC25Q96NG3 672 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 AGAP4Q96P64 663 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 SMIM14Q96QK8 99 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 SH3GL2Q99962 352 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 TMEM109Q9BVC6 243 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 POLR1EQ9GZS1 481 aaKnown RBP9.01□□□□□ -0.97
SMAD3-215ENST00000560424 EPB41L4BQ9H329 900 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 C10orf88Q9H8K7 445 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 ZBTB20Q9HC78 741 aaPredicted RBP9.01□□□□□ -0.97
SMAD3-215ENST00000560424 SYTL2Q9HCH5 934 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 NT5MQ9NPB1 228 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 MED4Q9NPJ6 270 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 RAB6BQ9NRW1 208 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 P4HTMQ9NXG6 502 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 SLC23A2Q9UGH3 650 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 SH3BGRL2Q9UJC5 107 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 SERTAD3Q9UJW9 196 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 CHKBQ9Y259 395 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 PTRH2Q9Y3E5 179 aaKnown RBP9.01□□□□□ -0.97
SMAD3-215ENST00000560424 CSAG2Q9Y5P2 127 aa9.01□□□□□ -0.97
SMAD3-215ENST00000560424 RGSL1A5PLK6 1076 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 E7EQ34 232 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 AP3B1O00203 1094 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 CHUKO15111 745 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 PSMD3O43242 534 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 VEGFDO43915 354 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 CDK14O94921 469 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 METTL18O95568 372 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 TTC4O95801 387 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 CD99P14209 185 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 BRAFP15056 766 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 HOXB4P17483 251 aaPredicted RBP9□□□□□ -0.97
SMAD3-215ENST00000560424 HSD17B3P37058 310 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 PREPP48147 710 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 SMSP52788 366 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 ART1P52961 327 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 ARL4CP56559 192 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 KCNK10P57789 538 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 BASP1P80723 227 aaKnown RBP9□□□□□ -0.97
SMAD3-215ENST00000560424 SARNPP82979 210 aaKnown RBP9□□□□□ -0.97
SMAD3-215ENST00000560424 TLE4Q04727 773 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 ABRQ12979 859 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 KCTD11Q693B1 232 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 ALG1LQ6GMV1 187 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 MYO7BQ6PIF6 2116 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 XKRXQ6PP77 449 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 TMEM207Q6UWW9 146 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 GFRALQ6UXV0 394 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 ADGRG6Q86SQ4 1221 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 GPR135Q8IZ08 494 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 CNPY4Q8N129 248 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 PDIK1LQ8N165 341 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 CARFQ8N187 725 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 GDAP1Q8TB36 358 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 CCDC110Q8TBZ0 833 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 FCRL5Q96RD9 977 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 SLX1AQ9BQ83 275 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 ZSCAN5AQ9BUG6 496 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 GBA3Q9H227 469 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 PPCSQ9HAB8 311 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 ETNK1Q9HBU6 452 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 XAB2Q9HCS7 855 aaKnown RBP9□□□□□ -0.97
SMAD3-215ENST00000560424 NFS1Q9Y697 457 aa9□□□□□ -0.97
SMAD3-215ENST00000560424 AGPSO00116 658 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 KCNK1O00180 336 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 RIPK2O43353 540 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 FZD6O60353 706 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 MTX2O75431 263 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms