RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 TNFAIP8L2Q6P589 184 aaPredicted RBP13.19□□□□□ -0.3
TRAF3-208ENST00000560371 HIST1H2AAQ96QV6 131 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 TPK1Q9H3S4 243 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 USP29Q9HBJ7 922 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 IFT80Q9P2H3 777 aaPredicted RBP13.19□□□□□ -0.3
TRAF3-208ENST00000560371 ERI3O43414 337 aaKnown RBP13.19□□□□□ -0.3
TRAF3-208ENST00000560371 PSMD7P51665 324 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 FAR1Q8WVX9 515 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 CRELD1Q96HD1 420 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 DUSP26Q9BV47 211 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 SLC35C2Q9NQQ7 365 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 SLC22A14Q9Y267 594 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 SQORQ9Y6N5 450 aa13.19□□□□□ -0.3
TRAF3-208ENST00000560371 GDF10P55107 478 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 FOLH1Q04609 750 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 DPY19L1Q2PZI1 675 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 MS4A13Q5J8X5 152 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 ZNF311Q5JNZ3 666 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 CDH24Q86UP0 819 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 BADQ92934 168 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 DNAJB4Q9UDY4 337 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 JMJD7P0C870 316 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 GNALP38405 381 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 HERVK_113P63132 956 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 PPP2R2BQ00005 443 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 ZNF846Q147U1 533 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 NPY5RQ15761 445 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 AAGABQ6PD74 315 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 OLFML1Q6UWY5 402 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 P4HA3Q7Z4N8 544 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 ARL10Q8N8L6 244 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 Q8N9G6 341 aaPredicted RBP13.18□□□□□ -0.3
TRAF3-208ENST00000560371 DCAF4L2Q8NA75 395 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 CLCC1Q96S66 551 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 CIB1Q99828 191 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 ERVK-6Q9BXR3 956 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 ARHGAP39Q9C0H5 1083 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 RGS17Q9UGC6 210 aaPredicted RBP13.18□□□□□ -0.3
TRAF3-208ENST00000560371 BCKDKO14874 412 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 IL1R2P27930 398 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 NCBP2-AS2Q69YL0 99 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 LENG8Q96PV6 779 aaPredicted RBP13.18□□□□□ -0.3
TRAF3-208ENST00000560371 GPATCH1Q9BRR8 931 aaKnown RBP13.18□□□□□ -0.3
TRAF3-208ENST00000560371 TLL2Q9Y6L7 1015 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 CCDC182A6NF36 153 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 YAP1P46937 504 aaKnown RBP13.18□□□□□ -0.3
TRAF3-208ENST00000560371 UPP1Q16831 310 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 C22orf39Q6P5X5 142 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 TRIB2Q92519 343 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 C12orf65Q9H3J6 166 aaKnown RBP13.18□□□□□ -0.3
TRAF3-208ENST00000560371 PIGUQ9H490 435 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 LDAHQ9H6V9 325 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 FADS3Q9Y5Q0 445 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 SCDO00767 359 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 PGM3O95394 542 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 TYRP1P17643 537 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 PTX3P26022 381 aaPredicted RBP13.18□□□□□ -0.3
TRAF3-208ENST00000560371 PDHA2P29803 388 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 GMLQ99445 158 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 ASXL3Q9C0F0 2248 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 A0A1W2PRB8 838 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 PITPNM1O00562 1244 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 GSC2O15499 205 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 CSNK2A2P19784 350 aaPredicted RBP13.18□□□□□ -0.3
TRAF3-208ENST00000560371 FBXO46Q6PJ61 603 aaPredicted RBP13.18□□□□□ -0.3
TRAF3-208ENST00000560371 RELTQ969Z4 430 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 TP53INP1Q96A56 240 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 TMEM125Q96AQ2 219 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 OTUB2Q96DC9 234 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 CEP290O15078 2479 aa13.18□□□□□ -0.3
TRAF3-208ENST00000560371 KDELR3O43731 214 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 SLC10A3P09131 477 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 FAUP35544 74 aaKnown RBP13.17□□□□□ -0.3
TRAF3-208ENST00000560371 SLC9B2Q86UD5 537 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 ZNF280BQ86YH2 543 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 SMPDL3AQ92484 453 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 P2RY13Q9BPV8 354 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 ARHGAP9Q9BRR9 750 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 NUSAP1Q9BXS6 441 aaKnown RBP13.17□□□□□ -0.3
TRAF3-208ENST00000560371 KCPQ6ZWJ8 1503 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 HAS3O00219 553 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 CBSLP0DN79 551 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 CBSP35520 551 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 NR1H2P55055 460 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 SPIN4Q56A73 249 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 ARSJQ5FYB0 599 aaPredicted RBP13.17□□□□□ -0.3
TRAF3-208ENST00000560371 REP15Q6BDI9 236 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 FBXO42Q6P3S6 717 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 C16orf70Q9BSU1 422 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 C1QTNF1Q9BXJ1 281 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 ARL8BQ9NVJ2 186 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 PHF24Q9UPV7 400 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 SHROOM3Q8TF72 1996 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 GRID2O43424 1007 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 ONECUT3O60422 494 aaPredicted RBP13.17□□□□□ -0.3
TRAF3-208ENST00000560371 MT-ND1P03886 318 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 DLG1Q12959 904 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 DPYSQ14117 519 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 NXPE1Q8N323 547 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 PLA2G15Q8NCC3 412 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms