RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 CD320Q9NPF0 282 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 KBTBD4Q9NVX7 518 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 HSPB11Q9Y547 144 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 LRRC72A6NJI9 287 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 GRID2O43424 1007 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 GMDSO60547 372 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 PDSS1Q5T2R2 415 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 ABHD13Q7L211 337 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 LRRC46Q96FV0 321 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 RNF157Q96PX1 679 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 WACQ9BTA9 647 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 H3BRB1 525 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 SCDO00767 359 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 NOBOXO60393 691 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 MPIP34949 423 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 HCAR3P49019 387 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 TROAPQ12815 778 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 MAMLD1Q13495 774 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 ADGRE1Q14246 886 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZC3H12AQ5D1E8 599 aaKnown RBP13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 ADGRD2Q7Z7M1 963 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 GALNT13Q8IUC8 556 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 METTL25Q8N6Q8 603 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 ELP5Q8TE02 316 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 STYXQ8WUJ0 223 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 THEM6Q8WUY1 208 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 TUT1Q9H6E5 874 aaKnown RBP13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 GNG8Q9UK08 70 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 CYP3A4P08684 503 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 ALPPL2P10696 532 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 HECTD2Q5U5R9 776 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF598Q86UK7 904 aaKnown RBP13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 OR7G2Q8NG99 324 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 PLLPQ9Y342 182 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 MRPS23Q9Y3D9 190 aaKnown RBP13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 ADAM18Q9Y3Q7 739 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 EFCAB6Q5THR3 1501 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 MPSTP25325 297 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 AIF1P55008 147 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 CRB2Q5IJ48 1285 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 KIAA1161Q6NSJ0 714 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 LACRTQ9GZZ8 138 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 SDHAF3Q9NRP4 125 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 PCDHGA11Q9Y5H2 935 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 A0A1W2PQ67 120 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 RPL10P27635 214 aaKnown RBP13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 ENPP2Q13822 863 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 IKBKEQ14164 716 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 EPHA10Q5JZY3 1008 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 LRIF1Q5T3J3 769 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 C2orf73Q8N5S3 287 aaPredicted RBP13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 PEX13Q92968 403 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 TMEM246Q9BRR3 403 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 UNC93B1Q9H1C4 597 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 USP20Q9Y2K6 914 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF521Q96K83 1311 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 RAD51DO75771 328 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 GSTM3P21266 225 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 CACNG1Q06432 222 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 TRAM1Q15629 374 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZPBP2Q6X784 338 aa13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF808Q8N4W9 903 aaPredicted RBP13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 C12orf65Q9H3J6 166 aaKnown RBP13.59□□□□□ -0.23
CSPG4P12-202ENST00000559989 GLYATL1P3A0A0U1RQE8 302 aa13.58□□□□□ -0.23
CSPG4P12-202ENST00000559989 LRRN3E7EW58 273 aa13.58□□□□□ -0.23
CSPG4P12-202ENST00000559989 TULP2O00295 520 aa13.58□□□□□ -0.23
CSPG4P12-202ENST00000559989 LILRB5O75023 590 aa13.58□□□□□ -0.23
CSPG4P12-202ENST00000559989 HTR1AP08908 422 aa13.58□□□□□ -0.23
CSPG4P12-202ENST00000559989 RIDAP52758 137 aaKnown RBP13.58□□□□□ -0.23
CSPG4P12-202ENST00000559989 CD47Q08722 323 aa13.58□□□□□ -0.23
CSPG4P12-202ENST00000559989 IL23RQ5VWK5 629 aa13.58□□□□□ -0.23
CSPG4P12-202ENST00000559989 MRPL41Q8IXM3 137 aaKnown RBP13.58□□□□□ -0.23
CSPG4P12-202ENST00000559989 SHKBP1Q8TBC3 707 aa13.58□□□□□ -0.23
CSPG4P12-202ENST00000559989 LRRC58Q96CX6 371 aa13.58□□□□□ -0.23
CSPG4P12-202ENST00000559989 OR2B2Q9GZK3 357 aa13.58□□□□□ -0.23
CSPG4P12-202ENST00000559989 LRRN3Q9H3W5 708 aa13.58□□□□□ -0.23
CSPG4P12-202ENST00000559989 LDAHQ9H6V9 325 aa13.58□□□□□ -0.23
CSPG4P12-202ENST00000559989 BIN3Q9NQY0 253 aa13.58□□□□□ -0.23
CSPG4P12-202ENST00000559989 DNAJB9Q9UBS3 223 aa13.58□□□□□ -0.23
CSPG4P12-202ENST00000559989 PCTPQ9UKL6 214 aa13.58□□□□□ -0.23
CSPG4P12-202ENST00000559989 RBM47A0AV96 593 aaKnown RBP13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 LYPLA1O75608 230 aaPredicted RBP13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 ZBTB7AO95365 584 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 RPS3P23396 243 aaKnown RBP eCLIP13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 TDGQ13569 410 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 LRRC38Q5VT99 294 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 CYP4V2Q6ZWL3 525 aaPredicted RBP13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 SLC29A4Q7RTT9 530 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 UNC93AQ86WB7 457 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 SENP8Q96LD8 212 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 DCSTAMPQ9H295 470 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 FZD3Q9NPG1 666 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 CALCAP01258 141 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 IDSP22304 550 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 AGTR1P30556 359 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 MRPL49Q13405 166 aaKnown RBP13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 ZC3HC1Q86WB0 502 aaKnown RBP13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 GLB1L3Q8NCI6 653 aaPredicted RBP13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 OR8S1Q8NH09 359 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 ELMO3Q96BJ8 720 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms