RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 GCAP28676 217 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 CSF2RBP32927 897 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 RPA3P35244 121 aaPredicted RBP9.76□□□□□ -0.85
USP3-216ENST00000559873 ARL4DP49703 201 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 HNMTP50135 292 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 PNLIPRP1P54315 467 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 CDKL1Q00532 357 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 GRB7Q14451 532 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 ACAP2Q15057 778 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 TSNQ15631 228 aaKnown RBP9.76□□□□□ -0.85
USP3-216ENST00000559873 CYP2A13Q16696 494 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 ISXQ2M1V0 245 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 CDKL4Q5MAI5 379 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 PHF19Q5T6S3 580 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 SBSNQ6UWP8 590 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 LRIG3Q6UXM1 1119 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 USP53Q70EK8 1073 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 TMPRSS7Q7RTY8 843 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 PRSS42Q7Z5A4 293 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 RAB44Q7Z6P3 723 aaPredicted RBP9.76□□□□□ -0.85
USP3-216ENST00000559873 KMT5CQ86Y97 462 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 RASGRP3Q8IV61 690 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 SLITRK4Q8IW52 837 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 DCBLD1Q8N8Z6 715 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 RHEBL1Q8TAI7 183 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 KCTD4Q8WVF5 259 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 ANKRD49Q8WVL7 239 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 JPH3Q8WXH2 748 aaPredicted RBP9.76□□□□□ -0.85
USP3-216ENST00000559873 KIAA1191Q96A73 305 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 CCDC74BQ96LY2 380 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 TGM7Q96PF1 710 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 PKP4Q99569 1192 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 EGFL8Q99944 293 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 NUDT22Q9BRQ3 303 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 TMEM109Q9BVC6 243 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 IQCGQ9H095 443 aaKnown RBP9.76□□□□□ -0.85
USP3-216ENST00000559873 PCBD2Q9H0N5 130 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 STMN4Q9H169 189 aaPredicted RBP9.76□□□□□ -0.85
USP3-216ENST00000559873 XKR8Q9H6D3 395 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 CCDC177Q9NQR7 707 aaPredicted RBP9.76□□□□□ -0.85
USP3-216ENST00000559873 INTS7Q9NVH2 962 aaKnown RBP9.76□□□□□ -0.85
USP3-216ENST00000559873 ADAMTS6Q9UKP5 1117 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 POMT2Q9UKY4 750 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 RNF112Q9ULX5 631 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 TMCO1Q9UM00 188 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 PDE10AQ9Y233 779 aa9.76□□□□□ -0.85
USP3-216ENST00000559873 DMXL1Q9Y485 3027 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 IGHV5-10-1A0A0J9YXX1 117 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 A0A0J9YY10 115 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 ISM1B1AKI9 464 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 CDC7O00311 574 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 BTN3A3O00478 584 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 GLRA3O75311 464 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 SLC16A8O95907 504 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 GSTA1P08263 222 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 ERGP11308 486 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 IMPA1P29218 277 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 OAS2P29728 719 aaKnown RBP9.75□□□□□ -0.85
USP3-216ENST00000559873 CSTF2P33240 577 aaKnown RBP eCLIP9.75□□□□□ -0.85
USP3-216ENST00000559873 CSRP3P50461 194 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 PGGT1BP53609 377 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 GFERP55789 205 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 FOXC1Q12948 553 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 TSTA3Q13630 321 aaPredicted RBP9.75□□□□□ -0.85
USP3-216ENST00000559873 PHKG1Q16816 387 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 PPP1R3AQ16821 1122 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 SLC5A12Q1EHB4 618 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 CCSMST1Q4G0I0 132 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 SNAP47Q5SQN1 464 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 BEND6Q5SZJ8 279 aaPredicted RBP9.75□□□□□ -0.85
USP3-216ENST00000559873 N4BP2L1Q5TBK1 243 aaPredicted RBP9.75□□□□□ -0.85
USP3-216ENST00000559873 THEMIS2Q5TEJ8 643 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 CACHD1Q5VU97 1274 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 CAPN13Q6MZZ7 669 aaPredicted RBP9.75□□□□□ -0.85
USP3-216ENST00000559873 SPESP1Q6UW49 350 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 ERMP1Q7Z2K6 904 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 GPSM1Q86YR5 675 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 ADGRF3Q8IZF5 1079 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 CENPLQ8N0S6 344 aaPredicted RBP9.75□□□□□ -0.85
USP3-216ENST00000559873 AGBL5Q8NDL9 886 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 OR2W6PQ8NHA6 318 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 ZNF480Q8WV37 535 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 FBXL8Q96CD0 374 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 LIN37Q96GY3 246 aaPredicted RBP9.75□□□□□ -0.85
USP3-216ENST00000559873 SCYL1Q96KG9 808 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 IL17FQ96PD4 163 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 CMKLR1Q99788 373 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 MENTQ9BUN1 341 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 ALG9Q9H6U8 611 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 CNOT10Q9H9A5 744 aaKnown RBP9.75□□□□□ -0.85
USP3-216ENST00000559873 C1GALT1Q9NS00 363 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 IGSF5Q9NSI5 407 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 UTP6Q9NYH9 597 aaKnown RBP9.75□□□□□ -0.85
USP3-216ENST00000559873 EURLQ9NYK6 297 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 ACTR10Q9NZ32 417 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 WWOXQ9NZC7 414 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 NUDT4Q9NZJ9 180 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 OGFRQ9NZT2 677 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 SENP1Q9P0U3 644 aa9.75□□□□□ -0.85
USP3-216ENST00000559873 STOX2Q9P2F5 926 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms