RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 NPRL3Q12980 569 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 C18orf63Q68DL7 685 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 ARHGAP17Q68EM7 881 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 GALNT17Q6IS24 598 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 CASC1Q6TDU7 716 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 C15orf39Q6ZRI6 1047 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 MCM10Q7L590 875 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 DGLUCYQ7Z3D6 616 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 MFN1Q8IWA4 741 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 TIGD4Q8IY51 512 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 PEX5LQ8IYB4 626 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 HDDC3Q8N4P3 179 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 RTL3Q8N8U3 475 aaKnown RBP3.49□□□□□ -1.85
SPG11-218ENST00000559754 ZNF248Q8NDW4 579 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 OR5R1Q8NH85 324 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 CFAP61Q8NHU2 1237 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 PSMA8Q8TAA3 256 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 TRPC4APQ8TEL6 797 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 SLC38A5Q8WUX1 472 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 APBB2Q92870 758 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 RHBDF1Q96CC6 855 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 C16orf45Q96MC5 204 aaPredicted RBP3.49□□□□□ -1.85
SPG11-218ENST00000559754 IWS1Q96ST2 819 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 CDRT15Q96T59 188 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 LITAFQ99732 161 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 RTN4RQ9BZR6 473 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 ANKZF1Q9H8Y5 726 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 SEBOXQ9HB31 216 aaPredicted RBP3.49□□□□□ -1.85
SPG11-218ENST00000559754 TCP11L1Q9NUJ3 509 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 ANO10Q9NW15 660 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 PAG1Q9NWQ8 432 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 TBK1Q9UHD2 729 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 APPL1Q9UKG1 709 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 KCNK7Q9Y2U2 307 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 MMP24Q9Y5R2 645 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 ARHGEF40Q8TER5 1519 aa3.49□□□□□ -1.85
SPG11-218ENST00000559754 ATAD2BQ9ULI0 1458 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 IGKV3D-15A0A087WSY6 115 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 RNF103-CHMP3A0A140T963 221 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 SMIM1B2RUZ4 78 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 RNF103O00237 685 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 SLC30A4O14863 429 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 CLIC2O15247 247 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 EIF3DO15371 548 aaKnown RBP eCLIP3.48□□□□□ -1.85
SPG11-218ENST00000559754 OGG1O15527 345 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 BUD23O43709 281 aaKnown RBP3.48□□□□□ -1.85
SPG11-218ENST00000559754 JRKO75564 520 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 DDHD2O94830 711 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 GBAP04062 536 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 ANXA7P20073 488 aaKnown RBP3.48□□□□□ -1.85
SPG11-218ENST00000559754 HSPA4P34932 840 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 PRKCIP41743 596 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 GPC3P51654 580 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 SNU13P55769 128 aaKnown RBP3.48□□□□□ -1.85
SPG11-218ENST00000559754 CLDN20P56880 219 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 POLR2FP61218 127 aaKnown RBP3.48□□□□□ -1.85
SPG11-218ENST00000559754 SIRPAP78324 504 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 MRPS34P82930 218 aaKnown RBP3.48□□□□□ -1.85
SPG11-218ENST00000559754 PTPRCAPQ14761 206 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 FUT11Q495W5 492 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 CDONQ4KMG0 1287 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 SLC39A12Q504Y0 691 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 C14orf177Q52M58 125 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 LRIF1Q5T3J3 769 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 C6orf163Q5TEZ5 329 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 MOXD1Q6UVY6 613 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 PPP1R21Q6ZMI0 780 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 SPATA21Q7Z572 469 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 CENPVQ7Z7K6 275 aaPredicted RBP3.48□□□□□ -1.85
SPG11-218ENST00000559754 NRROSQ86YC3 692 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 CCDC13Q8IYE1 715 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 STPG4Q8N801 248 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 NHLRC2Q8NBF2 726 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 ZNF485Q8NCK3 441 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 ACVR1CQ8NER5 493 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 RDM1Q8NG50 284 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 N4BP2L2Q92802 583 aaPredicted RBP3.48□□□□□ -1.85
SPG11-218ENST00000559754 CENPTQ96BT3 561 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 RRNAD1Q96FB5 475 aaKnown RBP3.48□□□□□ -1.85
SPG11-218ENST00000559754 RMDN2Q96LZ7 410 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 LRRC3BQ96PB8 259 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 NEK1Q96PY6 1258 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 INTS14Q96SY0 518 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 PARK7Q99497 189 aaKnown RBP3.48□□□□□ -1.85
SPG11-218ENST00000559754 UTP14AQ9BVJ6 771 aaKnown RBP3.48□□□□□ -1.85
SPG11-218ENST00000559754 EGLN1Q9GZT9 426 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 SLC5A7Q9GZV3 580 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 GFRA4Q9GZZ7 299 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 SPATC1LQ9H0A9 340 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 NOL11Q9H8H0 719 aaKnown RBP3.48□□□□□ -1.85
SPG11-218ENST00000559754 CNIH4Q9P003 139 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 ZNF624Q9P2J8 865 aaPredicted RBP3.48□□□□□ -1.85
SPG11-218ENST00000559754 DNAJB4Q9UDY4 337 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 PADI3Q9ULW8 664 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 R3HDM2Q9Y2K5 976 aaKnown RBP3.48□□□□□ -1.85
SPG11-218ENST00000559754 PCDHGA5Q9Y5G8 931 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 PCDHGA1Q9Y5H4 931 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 IKBKGQ9Y6K9 419 aa3.48□□□□□ -1.85
SPG11-218ENST00000559754 ZNF541Q9H0D2 1346 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 A0A0G2JLW4 131 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms