RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 ZFATQ9P243 1243 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 TRMT6Q9UJA5 497 aaKnown RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 FBXO5Q9UKT4 447 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 PLAGL1Q9UM63 463 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 ICKQ9UPZ9 632 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 BTRCQ9Y297 605 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 AP1M2Q9Y6Q5 423 aa4.23□□□□□ -1.73
SNX1-205ENST00000559339 KMT2BQ9UMN6 2715 aaPredicted RBP4.23□□□□□ -1.73
SNX1-205ENST00000559339 BPTFQ12830 3046 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 TARM1B6A8C7 271 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 C9J4A7 227 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 MEN1O00255 615 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 EIF3FO00303 357 aaPredicted RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 ATXN7O15265 892 aaPredicted RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 ZSCAN9O15535 394 aaPredicted RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 SRPX2O60687 465 aaPredicted RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 KATNA1O75449 491 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 OR2B3O76000 313 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 URI1O94763 535 aaPredicted RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 HAUS5O94927 633 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 CCNDBP1O95273 360 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 MATN4O95460 622 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 DLGAP3O95886 979 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 SYF2O95926 243 aaKnown RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 RECKO95980 971 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 NTRK1P04629 796 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 ERVK-10P10266 1014 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 PRKAR1AP10644 381 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 ST6GAL1P15907 406 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 UGT2B7P16662 529 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 ZNF28P17035 718 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 IVDP26440 423 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 CMPK1P30085 196 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 PKLRP30613 574 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 DLSTP36957 453 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 CCR10P46092 362 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 CARSP49589 748 aaKnown RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 CLCN7P51798 805 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 SLC12A2P55011 1212 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 ITGA1P56199 1179 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 IL2P60568 153 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 MPP1Q00013 466 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 PDIA2Q13087 525 aaKnown RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 CUL1Q13616 776 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 TSTA3Q13630 321 aaPredicted RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 FRG1Q14331 258 aaKnown RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 GPR19Q15760 415 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 KYNUQ16719 465 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 WHAMMP3Q1A5X7 153 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 KLHL38Q2WGJ6 581 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 MSS51Q4VC12 460 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 CRTC2Q53ET0 693 aaPredicted RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 TCTE1Q5JU00 501 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 HP1BP3Q5SSJ5 553 aaPredicted RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 THEMIS2Q5TEJ8 643 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 C8orf74Q6P047 294 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 C16orf46Q6P387 395 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 TLDC1Q6P9B6 456 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 BORAQ6PGQ7 559 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 FBXO38Q6PIJ6 1188 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 CDHR3Q6ZTQ4 885 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 CEP128Q6ZU80 1094 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 MICALCLQ6ZW33 695 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 GALNT7Q86SF2 657 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 CNTN4Q8IWV2 1026 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 SYTL1Q8IYJ3 562 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 ZBED8Q8IZ13 594 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 UNC5BQ8IZJ1 945 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 MYO1HQ8N1T3 1032 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 C17orf53Q8N3J3 647 aaPredicted RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 C2orf73Q8N5S3 287 aaPredicted RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 GPATCH11Q8N954 259 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 GALNT6Q8NCL4 622 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 FBXO36Q8NEA4 188 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 OR9A1PQ8NGU1 263 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 OR2L8Q8NGY9 312 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 HMGCLL1Q8TB92 370 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 LKAAEAR1Q8TD35 194 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 MCOLN3Q8TDD5 553 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 APOBEC4Q8WW27 367 aaKnown RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 ASB11Q8WXH4 323 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 THAP4Q8WY91 577 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 STARD8Q92502 1023 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 DLG3Q92796 817 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 INPP5DQ92835 1189 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 MR1Q95460 341 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 ZNF501Q96CX3 271 aaPredicted RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 CFAP36Q96G28 342 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 CRELD1Q96HD1 420 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 SLC45A3Q96JT2 553 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 LRFN5Q96NI6 719 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 TRAPPC9Q96Q05 1148 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 NDNQ99608 321 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 GPR21Q99679 349 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 TRIM56Q9BRZ2 755 aaKnown RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 TRIM51Q9BSJ1 452 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 AARSD1Q9BTE6 412 aaKnown RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 NDC1Q9BTX1 674 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 TRIM54Q9BYV2 358 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 SPRY4Q9C004 299 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms