RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 VPS41P49754 854 aa17.1■□□□□ 0.33
TPM1-218ENST00000559281 PGDP52209 483 aa17.1■□□□□ 0.33
TPM1-218ENST00000559281 SF1Q15637 639 aaKnown RBP17.1■□□□□ 0.33
TPM1-218ENST00000559281 DEFB110Q30KQ9 67 aa17.1■□□□□ 0.33
TPM1-218ENST00000559281 ZC3H12BQ5HYM0 836 aaKnown RBP17.1■□□□□ 0.33
TPM1-218ENST00000559281 MLIPQ5VWP3 458 aa17.1■□□□□ 0.33
TPM1-218ENST00000559281 FAM198BQ6UWH4 519 aa17.1■□□□□ 0.33
TPM1-218ENST00000559281 CES3Q6UWW8 571 aa17.1■□□□□ 0.33
TPM1-218ENST00000559281 RAB43Q86YS6 212 aa17.1■□□□□ 0.33
TPM1-218ENST00000559281 ZNF655Q8N720 491 aaPredicted RBP17.1■□□□□ 0.33
TPM1-218ENST00000559281 DLG3Q92796 817 aa17.1■□□□□ 0.33
TPM1-218ENST00000559281 TRIM55Q9BYV6 548 aa17.1■□□□□ 0.33
TPM1-218ENST00000559281 EURLQ9NYK6 297 aa17.1■□□□□ 0.33
TPM1-218ENST00000559281 IFT80Q9P2H3 777 aaPredicted RBP17.1■□□□□ 0.33
TPM1-218ENST00000559281 NDOR1Q9UHB4 597 aa17.1■□□□□ 0.33
TPM1-218ENST00000559281 PCDHGB7Q9Y5F8 929 aa17.1■□□□□ 0.33
TPM1-218ENST00000559281 TCRBV7S3A2A0A539 114 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 SDR42E2A6NKP2 422 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 H3BMH7 237 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 K7EM74 188 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 IGHEP01854 428 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 ESR1P03372 595 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 MLNP12872 115 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 CHRM3P20309 590 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 MAGP20916 626 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 PEBP1P30086 187 aaKnown RBP17.09■□□□□ 0.33
TPM1-218ENST00000559281 FMO4P31512 558 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 PTGIRP43119 386 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 MAGEA6P43360 314 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 TERF1P54274 439 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 ARSFP54793 590 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 ADARP55265 1226 aaKnown RBP17.09■□□□□ 0.33
TPM1-218ENST00000559281 FOXK1P85037 733 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 KCNJ11Q14654 390 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 SSPNQ14714 243 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 ZNF385CQ66K41 422 aaPredicted RBP17.09■□□□□ 0.33
TPM1-218ENST00000559281 KIAA0930Q6ICG6 404 aaPredicted RBP17.09■□□□□ 0.33
TPM1-218ENST00000559281 MCATQ8IVS2 390 aaKnown RBP17.09■□□□□ 0.33
TPM1-218ENST00000559281 RASGEF1CQ8N431 466 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 C2orf73Q8N5S3 287 aaPredicted RBP17.09■□□□□ 0.33
TPM1-218ENST00000559281 LINC01555Q8NAE3 123 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 ZUFSPQ96AP4 578 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 MENTQ9BUN1 341 aa17.09■□□□□ 0.33
TPM1-218ENST00000559281 TENM4Q6N022 2769 aa17.08■□□□□ 0.33
TPM1-218ENST00000559281 TARM1B6A8C7 271 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 C1orf105O95561 183 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 CBSLP0DN79 551 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 PIM1P11309 404 aaPredicted RBP17.08■□□□□ 0.32
TPM1-218ENST00000559281 OGNP20774 298 aaKnown RBP17.08■□□□□ 0.32
TPM1-218ENST00000559281 ALAS2P22557 587 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 ARNTP27540 789 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 CBSP35520 551 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 CHAF1BQ13112 559 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 GRB7Q14451 532 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 TYSND1Q2T9J0 566 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 C1orf189Q5VU69 101 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 CPZQ66K79 652 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 NEPROQ6NW34 567 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 FIGLAQ6QHK4 219 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 ZBTB2Q8N680 514 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 LPGAT1Q92604 370 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 BIRC8Q96P09 236 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 IL17FQ96PD4 163 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 GBP5Q96PP8 586 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 XAB2Q9HCS7 855 aaKnown RBP17.08■□□□□ 0.32
TPM1-218ENST00000559281 MLXIPLQ9NP71 852 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 DHCR7Q9UBM7 475 aaKnown RBP17.08■□□□□ 0.32
TPM1-218ENST00000559281 CIDEBQ9UHD4 219 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 ZNF451Q9Y4E5 1061 aa17.08■□□□□ 0.32
TPM1-218ENST00000559281 FAM237BA0A1B0GVD1 139 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 GOLGA8KD6RF30 607 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 E5RI56 91 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 GOLGA8TH3BQL2 631 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 PEX12O00623 359 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 HCRTR1O43613 425 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 AVILO75366 819 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 ATP5DP30049 168 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 COILP38432 576 aaPredicted RBP17.07■□□□□ 0.32
TPM1-218ENST00000559281 FOLR3P41439 243 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 THOC5Q13769 683 aaKnown RBP17.07■□□□□ 0.32
TPM1-218ENST00000559281 DHX34Q14147 1143 aaKnown RBP17.07■□□□□ 0.32
TPM1-218ENST00000559281 IGFBP7Q16270 282 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 NKAIN1Q4KMZ8 207 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 TCTE1Q5JU00 501 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 CTSL3PQ5NE16 218 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 YOD1Q5VVQ6 348 aaPredicted RBP17.07■□□□□ 0.32
TPM1-218ENST00000559281 PAPD7Q5XG87 772 aaKnown RBP17.07■□□□□ 0.32
TPM1-218ENST00000559281 CCDC137Q6PK04 289 aaKnown RBP17.07■□□□□ 0.32
TPM1-218ENST00000559281 TAX1BP1Q86VP1 789 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 HPS6Q86YV9 775 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 FAM20CQ8IXL6 584 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 MCUQ8NE86 351 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 PTERQ96BW5 349 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 FER1L6-AS2Q96M78 137 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 INTS10Q9NVR2 710 aaKnown RBP17.07■□□□□ 0.32
TPM1-218ENST00000559281 KLHL20Q9Y2M5 609 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 CRYL1Q9Y2S2 319 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 PTRH2Q9Y3E5 179 aaKnown RBP17.07■□□□□ 0.32
TPM1-218ENST00000559281 PIKFYVEQ9Y2I7 2098 aa17.07■□□□□ 0.32
TPM1-218ENST00000559281 MYO18BQ8IUG5 2567 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms