RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 PNLIPRP1P54315 467 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 BST1Q10588 318 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 CYP2A13Q16696 494 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 PTCHD3Q3KNS1 767 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 CFAP157Q5JU67 520 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 C6orf132Q5T0Z8 1188 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 ANKS6Q68DC2 871 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 OR52E1Q8NGJ3 308 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 OR56A3Q8NH54 315 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 MAPK15Q8TD08 544 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 ATOH1Q92858 354 aaPredicted RBP17.54■□□□□ 0.4
CLPX-203ENST00000558958 IL17FQ96PD4 163 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 NRTNQ99748 197 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 ATG10Q9H0Y0 220 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 GSTO2Q9H4Y5 243 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 LNPEPQ9UIQ6 1025 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 PCTPQ9UKL6 214 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 ADAMTS9Q9P2N4 1935 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 TMEM114B3SHH9 223 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 E7ENX8 843 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 KDM1AO60341 852 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 NPHS1O60500 1241 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 PKLRP30613 574 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 FASLGP48023 281 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 RAB28P51157 221 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 NAA20P61599 178 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 TAP2Q03519 686 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 NAE1Q13564 534 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 FRMD7Q6ZUT3 714 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 RPS27LQ71UM5 84 aaKnown RBP17.53■□□□□ 0.4
CLPX-203ENST00000558958 GATAD2AQ86YP4 633 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 RBM12BQ8IXT5 1001 aaKnown RBP17.53■□□□□ 0.4
CLPX-203ENST00000558958 KLHDC8AQ8IYD2 350 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 LRRC56Q8IYG6 542 aaPredicted RBP17.53■□□□□ 0.4
CLPX-203ENST00000558958 SYTL1Q8IYJ3 562 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 ARL14Q8N4G2 192 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 AVL9Q8NBF6 648 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 GPR156Q8NFN8 814 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 OR2I1PQ8NGU4 316 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 ZNF483Q8TF39 744 aaPredicted RBP17.53■□□□□ 0.4
CLPX-203ENST00000558958 CNDP1Q96KN2 507 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 NSUN5Q96P11 429 aaKnown RBP17.53■□□□□ 0.4
CLPX-203ENST00000558958 GTPBP2Q9BX10 602 aaKnown RBP17.53■□□□□ 0.4
CLPX-203ENST00000558958 RAB11FIP5Q9BXF6 653 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 DRC3Q9H069 523 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 NLGN3Q9NZ94 848 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 ICKQ9UPZ9 632 aa17.53■□□□□ 0.4
CLPX-203ENST00000558958 ZNF839A8K0R7 811 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 K7EPI3 171 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 CCNT2O60583 730 aaKnown RBP17.52■□□□□ 0.4
CLPX-203ENST00000558958 SNNO75324 88 aaPredicted RBP17.52■□□□□ 0.4
CLPX-203ENST00000558958 ARRB2P32121 409 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 LSP1P33241 339 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 SERPINB5P36952 375 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 SLC1A6P48664 564 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 MAZP56270 477 aaKnown RBP17.52■□□□□ 0.4
CLPX-203ENST00000558958 GNGT1P63211 74 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 HHEXQ03014 270 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 RCN2Q14257 317 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 FASTKQ14296 549 aaKnown RBP17.52■□□□□ 0.4
CLPX-203ENST00000558958 GPR18Q14330 331 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 TUBB8Q3ZCM7 444 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.52■□□□□ 0.4
CLPX-203ENST00000558958 LRRC70Q7Z2Q7 622 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 RAB42Q8N4Z0 105 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 LMNTD1Q8N9Z9 388 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 PPFIBP2Q8ND30 876 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 PPP4R1Q8TF05 950 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 LCN9Q8WX39 176 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 PYCR2Q96C36 320 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 PITPNM3Q9BZ71 974 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 C20orf27Q9GZN8 174 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 KCNH6Q9H252 994 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 SLC32A1Q9H598 525 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 XKR8Q9H6D3 395 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 THAP1Q9NVV9 213 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 OPTCQ9UBM4 332 aa17.52■□□□□ 0.4
CLPX-203ENST00000558958 TCP11X1B4DZS4 312 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 ITM2AO43736 263 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 PCDHGA12O60330 932 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 ZNF806P0C7X5 589 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 NBL1P41271 181 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 CCR10P46092 362 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 CDH13P55290 713 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 ABCE1P61221 599 aaKnown RBP17.51■□□□□ 0.39
CLPX-203ENST00000558958 CLCQ05315 142 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 C14orf28Q4W4Y0 310 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 ATG14Q6ZNE5 492 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 LSMEM2Q8N112 164 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 MINDY1Q8N5J2 469 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 ARL10Q8N8L6 244 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 LINC01555Q8NAE3 123 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 KYQ8NBH2 561 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 OR2L8Q8NGY9 312 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 HMGCLL1Q8TB92 370 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 MED8Q96G25 268 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 TRMOQ9BU70 441 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 DUSP23Q9BVJ7 150 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 SGPP1Q9BX95 441 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 ZNF395Q9H8N7 513 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms