RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 TUBB2BQ9BVA1 445 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 DDA1Q9BW61 102 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 CPNE5Q9HCH3 593 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 LRRC4CQ9HCJ2 640 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 FAM60AQ9NP50 221 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 C1GALT1Q9NS00 363 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 ZFATQ9P243 1243 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 TRMT6Q9UJA5 497 aaKnown RBP13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 ADAMTS6Q9UKP5 1117 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 VWA7Q9Y334 891 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 COMMD10Q9Y6G5 202 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 IGSF10Q6WRI0 2623 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 NAV2Q8IVL1 2488 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 TCRBV9S1A1TA0A576 114 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 RASGRF2O14827 1237 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 PSIP1O75475 530 aaKnown RBP13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 SPAG6O75602 509 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 FAM155BO75949 473 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 C1QAP02745 245 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 RPN2P04844 631 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 PSMB5P28074 263 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 RAB15P59190 212 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 TUBB3Q13509 450 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 ZNF460Q14592 562 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 TTLL9Q3SXZ7 439 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 TTC23LQ6PF05 361 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 TMEM207Q6UWW9 146 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 ZC3HC1Q86WB0 502 aaKnown RBP13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 RASGRP3Q8IV61 690 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 PPFIBP2Q8ND30 876 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 OR2L8Q8NGY9 312 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 GABPB2Q8TAK5 448 aaPredicted RBP13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 DLG3Q92796 817 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 NKD1Q969G9 470 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 PITPNM3Q9BZ71 974 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 ASPSCR1Q9BZE9 553 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 TWSG1Q9GZX9 223 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 FGF21Q9NSA1 209 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 TAS2R13Q9NYV9 303 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 OR6C2Q9NZP2 312 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 PILRAQ9UKJ1 303 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 IKZF3Q9UKT9 509 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 ACSL6Q9UKU0 697 aa13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 MTO1Q9Y2Z2 717 aaKnown RBP13.36□□□□□ -0.27
TSPAN3-205ENST00000558745 SNRNP200O75643 2136 aaKnown RBP13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 A0A1W2PPV9 198 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 MATN2O00339 956 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 PRICKLE3O43900 615 aaPredicted RBP13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 RAD1O60671 282 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 STK17BO94768 372 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 KIAA0754O94854 1291 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 SYF2O95926 243 aaKnown RBP13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 NTRK1P04629 796 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 MPC1LP0DKB6 136 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 LIPCP11150 499 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 FGF5P12034 268 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 WT1P19544 449 aaPredicted RBP13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 FDXRP22570 491 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 ATP5DP30049 168 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 EFTUD2Q15029 972 aaKnown RBP eCLIP13.35□□□□□ -0.272e-8■■■■■ 32.1
TSPAN3-205ENST00000558745 DEFB110Q30KQ9 67 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 PWWP2BQ6NUJ5 590 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 SUSD1Q6UWL2 747 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 CDHR3Q6ZTQ4 885 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 GALNT7Q86SF2 657 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 CEP112Q8N8E3 955 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 OR9A1PQ8NGU1 263 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 FBF1Q8TES7 1133 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 ASB11Q8WXH4 323 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 ZNF501Q96CX3 271 aaPredicted RBP13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 MRRFQ96E11 262 aaKnown RBP13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 LINGO1Q96FE5 620 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 DPH1Q9BZG8 443 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 B3GNT4Q9C0J1 378 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 AKIRIN1Q9H9L7 192 aaPredicted RBP13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 FAM114A2Q9NRY5 505 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 ABCF3Q9NUQ8 709 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 KLHL42Q9P2K6 505 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 BTRCQ9Y297 605 aa13.35□□□□□ -0.27
TSPAN3-205ENST00000558745 A0A0J9YY10 115 aa13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 FAM95CA0A1B0GW59 222 aa13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 FAM159BA6NKW6 160 aa13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 STMND1H3BQB6 276 aa13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 GFYI3L273 518 aa13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 NRP2O60462 931 aa13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 TSPAN12O95859 305 aa13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 RHOXF2BP0C7M4 288 aa13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 ECHS1P30084 290 aa13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 CCNFP41002 786 aa13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 GRIA3P42263 894 aa13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 TAS2R39P59534 338 aa13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 CXADRP78310 365 aa13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 ACY1Q03154 408 aa13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 PDAP1Q13442 181 aaKnown RBP13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 TSTA3Q13630 321 aaPredicted RBP13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 KIR2DS3Q14952 304 aa13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 SF1Q15637 639 aaKnown RBP13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 KBTBD12Q3ZCT8 623 aa13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 ARHGAP40Q5TG30 622 aa13.34□□□□□ -0.27
TSPAN3-205ENST00000558745 KIAA1614Q5VZ46 1190 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms