RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 MATN2O00339 956 aa16.89■□□□□ 0.29
TPM1-214ENST00000558544 KIF1CO43896 1103 aaKnown RBP16.89■□□□□ 0.29
TPM1-214ENST00000558544 SLC16A8O95907 504 aa16.89■□□□□ 0.29
TPM1-214ENST00000558544 ADRB1P08588 477 aa16.89■□□□□ 0.29
TPM1-214ENST00000558544 LTA4HP09960 611 aaKnown RBP16.89■□□□□ 0.29
TPM1-214ENST00000558544 SPINK2P20155 84 aa16.89■□□□□ 0.29
TPM1-214ENST00000558544 PEBP1P30086 187 aaKnown RBP16.89■□□□□ 0.29
TPM1-214ENST00000558544 KPNA2P52292 529 aaKnown RBP16.89■□□□□ 0.29
TPM1-214ENST00000558544 ZFP36L1Q07352 338 aaKnown RBP16.89■□□□□ 0.29
TPM1-214ENST00000558544 PPP1R3AQ16821 1122 aa16.89■□□□□ 0.29
TPM1-214ENST00000558544 ANKS6Q68DC2 871 aa16.89■□□□□ 0.29
TPM1-214ENST00000558544 ADAMTSL2Q86TH1 951 aa16.89■□□□□ 0.29
TPM1-214ENST00000558544 TDRPQ86YL5 185 aa16.89■□□□□ 0.29
TPM1-214ENST00000558544 CENPLQ8N0S6 344 aaPredicted RBP16.89■□□□□ 0.29
TPM1-214ENST00000558544 ZDHHC12Q96GR4 267 aa16.89■□□□□ 0.29
TPM1-214ENST00000558544 IGSF5Q9NSI5 407 aa16.89■□□□□ 0.29
TPM1-214ENST00000558544 UTP6Q9NYH9 597 aaKnown RBP16.89■□□□□ 0.29
TPM1-214ENST00000558544 ACTR10Q9NZ32 417 aa16.89■□□□□ 0.29
TPM1-214ENST00000558544 LNPEPQ9UIQ6 1025 aa16.89■□□□□ 0.29
TPM1-214ENST00000558544 KLK13Q9UKR3 277 aa16.89■□□□□ 0.29
TPM1-214ENST00000558544 POMT2Q9UKY4 750 aa16.89■□□□□ 0.29
TPM1-214ENST00000558544 C2orf74A8MZ97 194 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 RFPL1O75677 317 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 RASSF9O75901 435 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 GUCA1CO95843 209 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 MPOP05164 745 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 ENO2P09104 434 aaPredicted RBP16.88■□□□□ 0.29
TPM1-214ENST00000558544 HIST1H2AGP0C0S8 130 aaPredicted RBP16.88■□□□□ 0.29
TPM1-214ENST00000558544 ERGP11308 486 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 H2AFXP16104 143 aaPredicted RBP16.88■□□□□ 0.29
TPM1-214ENST00000558544 HIST1H2ADP20671 130 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 CCKBRP32239 447 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 PNLIPRP1P54315 467 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 ATP6V0D1P61421 351 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 FASTKQ14296 549 aaKnown RBP16.88■□□□□ 0.29
TPM1-214ENST00000558544 CYP2A13Q16696 494 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 FRA10AC1Q70Z53 315 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 CCDC91Q7Z6B0 441 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 CACTIN-AS1Q8N1I8 211 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 PPFIBP2Q8ND30 876 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 MZB1Q8WU39 189 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 ZNF480Q8WV37 535 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 PTERQ96BW5 349 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 NXNL1Q96CM4 212 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 HIST1H2AHQ96KK5 128 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 PPM1MQ96MI6 270 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 HIST1H2AJQ99878 128 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 H2AFJQ9BTM1 129 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 TRIM54Q9BYV2 358 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 PCMTD2Q9NV79 361 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 ARL15Q9NXU5 204 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 EURLQ9NYK6 297 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 NOVA2Q9UNW9 492 aaKnown RBP16.88■□□□□ 0.29
TPM1-214ENST00000558544 WASF3Q9UPY6 502 aa16.88■□□□□ 0.29
TPM1-214ENST00000558544 HEATR5BQ9P2D3 2071 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 TLDC2A0PJX2 215 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 ISM1B1AKI9 464 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 CDH16O75309 829 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 UGT2B7P16662 529 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 TFEBP19484 476 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 IMPA1P29218 277 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 SLC26A3P40879 764 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 TSTA3Q13630 321 aaPredicted RBP16.87■□□□□ 0.29
TPM1-214ENST00000558544 C16orf72Q14CZ0 275 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 OR4D1Q15615 310 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 CACHD1Q5VU97 1274 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 FBXO38Q6PIJ6 1188 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 TIFABQ6ZNK6 161 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 SYTL1Q8IYJ3 562 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 CYP4X1Q8N118 509 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 PLD6Q8N2A8 252 aaKnown RBP16.87■□□□□ 0.29
TPM1-214ENST00000558544 CCDC138Q96M89 665 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 MAP3K3Q99759 626 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 SCNM1Q9BWG6 230 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 STRADBQ9C0K7 418 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 ALG9Q9H6U8 611 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 NMRAL1Q9HBL8 299 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 STOX2Q9P2F5 926 aaPredicted RBP16.87■□□□□ 0.29
TPM1-214ENST00000558544 PDP2Q9P2J9 529 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 OARD1Q9Y530 152 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 AKAP13Q12802 2813 aa16.87■□□□□ 0.29
TPM1-214ENST00000558544 TLCD2A6NGC4 264 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 FOXO6A8MYZ6 492 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 TMX2-CTNND1H3BSU7 103 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 KLHL2O95198 593 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 CDH3P22223 829 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 PSMB5P28074 263 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 PRDX3P30048 256 aaKnown RBP16.86■□□□□ 0.29
TPM1-214ENST00000558544 HSD17B2P37059 387 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 GLRBP48167 497 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 SEPHS1P49903 392 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 AP1S2P56377 157 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 TRA2AQ13595 282 aaKnown RBP eCLIP16.86■□□□□ 0.29
TPM1-214ENST00000558544 KIR2DS3Q14952 304 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 ARHGAP19Q14CB8 494 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 FAM83EQ2M2I3 478 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 BEND6Q5SZJ8 279 aaPredicted RBP16.86■□□□□ 0.29
TPM1-214ENST00000558544 SPESP1Q6UW49 350 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 SUSD1Q6UWL2 747 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 PRSS42Q7Z5A4 293 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms