RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 MARK1Q9P0L2 795 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 UTS2RQ9UKP6 389 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 MYO9BQ13459 2157 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 RNF103-CHMP3A0A140T963 221 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 GFYI3L273 518 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 MMP20O60882 483 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 KCNH1O95259 989 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 CAPNS1P04632 268 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 HNRNPA1P09651 372 aaKnown RBP eCLIP10.28□□□□□ -0.76
TPM1-210ENST00000558264 FASP25445 335 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 SLC6A12P48065 614 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 MRPL19P49406 292 aaKnown RBP10.28□□□□□ -0.76
TPM1-210ENST00000558264 EEFSECP57772 596 aaKnown RBP10.28□□□□□ -0.76
TPM1-210ENST00000558264 PWP1Q13610 501 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 GRM2Q14416 872 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 PLEKHS1Q5SXH7 462 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 C9orf50Q5SZB4 431 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 ZDHHC20Q5W0Z9 365 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 ANKRD26P1Q6NSI1 321 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 DPPA4Q7L190 304 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 TECPR1Q7Z6L1 1165 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 MSRB3Q8IXL7 192 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 DDHD1Q8NEL9 900 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 FBXO30Q8TB52 745 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 OSCP1Q8WVF1 389 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 ARRDC3Q96B67 414 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 TMEM159Q96B96 161 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 DUS3LQ96G46 650 aaKnown RBP10.28□□□□□ -0.76
TPM1-210ENST00000558264 VPS50Q96JG6 964 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 ZNF597Q96LX8 424 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 UHRF1Q96T88 793 aaPredicted RBP10.28□□□□□ -0.76
TPM1-210ENST00000558264 ZSCAN5AQ9BUG6 496 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 AGPAT4Q9NRZ5 378 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 DNAJC11Q9NVH1 559 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 ANAPC2Q9UJX6 822 aa10.28□□□□□ -0.76
TPM1-210ENST00000558264 TCF20Q9UGU0 1960 aaKnown RBP10.27□□□□□ -0.76
TPM1-210ENST00000558264 DNAH14Q0VDD8 3507 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 KCNE1BA0A087WTH5 132 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 SEC24DO94855 1032 aaPredicted RBP10.27□□□□□ -0.77
TPM1-210ENST00000558264 FTH1P02794 183 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 MAP4P27816 1152 aaKnown RBP10.27□□□□□ -0.77
TPM1-210ENST00000558264 WASP42768 502 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 CDKN2CP42773 168 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 POLE2P56282 527 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 RPS14P62263 151 aaKnown RBP10.27□□□□□ -0.77
TPM1-210ENST00000558264 IRF8Q02556 426 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 XKR6Q5GH73 641 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 ERAP2Q6P179 960 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 CRTC3Q6UUV7 619 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 GCNT7Q6ZNI0 430 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 LRRC70Q7Z2Q7 622 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 TRAPPC5Q8IUR0 188 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 DPP10Q8N608 796 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 HERVK_113Q902F9 699 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 NRTNQ99748 197 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 GRIP2Q9C0E4 1043 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 OR2AG1Q9H205 316 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 IGFLR1Q9H665 355 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 CARS2Q9HA77 564 aaKnown RBP10.27□□□□□ -0.77
TPM1-210ENST00000558264 SMOXQ9NWM0 555 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 PPT2Q9UMR5 302 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 CEP290O15078 2479 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 HEPACAM2A8MVW5 462 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 EI24O14681 340 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 ZNF197O14709 1029 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 SLC9A3R1O14745 358 aaPredicted RBP10.27□□□□□ -0.77
TPM1-210ENST00000558264 WNT9AO14904 365 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 HNRNPRO43390 633 aaKnown RBP10.27□□□□□ -0.77
TPM1-210ENST00000558264 RECQL5O94762 991 aaPredicted RBP10.27□□□□□ -0.77
TPM1-210ENST00000558264 SLC16A8O95907 504 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 ADH1CP00326 375 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 FAM58BPP0C7Q3 252 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 SDC1P18827 310 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 HOXA9P31269 272 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 PPP1R8Q12972 351 aaKnown RBP10.27□□□□□ -0.77
TPM1-210ENST00000558264 GPM6BQ13491 265 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 LIN52Q52LA3 116 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 RAET1GQ6H3X3 334 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 TMEM214Q6NUQ4 689 aaKnown RBP10.27□□□□□ -0.77
TPM1-210ENST00000558264 ENPP6Q6UWR7 440 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 THOC6Q86W42 341 aaKnown RBP10.27□□□□□ -0.77
TPM1-210ENST00000558264 PTRH1Q86Y79 214 aaKnown RBP10.27□□□□□ -0.77
TPM1-210ENST00000558264 MMAAQ8IVH4 418 aaKnown RBP10.27□□□□□ -0.77
TPM1-210ENST00000558264 CHERPQ8IWX8 916 aaKnown RBP10.27□□□□□ -0.77
TPM1-210ENST00000558264 NPAS3Q8IXF0 933 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 C2orf73Q8N5S3 287 aaPredicted RBP10.27□□□□□ -0.77
TPM1-210ENST00000558264 ANKFN1Q8N957 763 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 TRPV3Q8NET8 790 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 OTUB2Q96DC9 234 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 NSMCE2Q96MF7 247 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 ZNF583Q96ND8 569 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 CLMPQ9H6B4 373 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 GPRC5BQ9NZH0 403 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 SNX6Q9UNH7 406 aa10.27□□□□□ -0.77
TPM1-210ENST00000558264 MAGED1Q9Y5V3 778 aaPredicted RBP10.27□□□□□ -0.77
TPM1-210ENST00000558264 SPTBN5Q9NRC6 3674 aaKnown RBP10.26□□□□□ -0.77
TPM1-210ENST00000558264 ATG13O75143 517 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 MPC1LP0DKB6 136 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 BMP2P12643 396 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 PBX2P40425 430 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms