RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 TMEM121Q9BTD3 319 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 ILKAPQ9H0C8 392 aaPredicted RBP15.33■□□□□ 0.04
SCFD1-224ENST00000557713 IMPACTQ9P2X3 320 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 SLC5A6Q9Y289 635 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 NTNG1Q9Y2I2 539 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 PCDHGA10Q9Y5H3 936 aa15.33■□□□□ 0.04
SCFD1-224ENST00000557713 NOTCH2Q04721 2471 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 TCRBV7S2A1N4TA0A589 114 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 ANKUB1A6NFN9 424 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 GPC4O75487 556 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 MAGP20916 626 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 CD9P21926 228 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 MMP11P24347 488 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 ARSFP54793 590 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 CSE1LP55060 971 aaKnown RBP15.32■□□□□ 0.04
SCFD1-224ENST00000557713 CDH17Q12864 832 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 AIMP2Q13155 320 aaKnown RBP15.32■□□□□ 0.04
SCFD1-224ENST00000557713 CYP2A13Q16696 494 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 ZNF787Q6DD87 383 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 RAD9BQ6WBX8 426 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 TTLL10Q6ZVT0 673 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 OVCH1Q7RTY7 1134 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 VRK3Q8IV63 474 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 LMNTD1Q8N9Z9 388 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 DLG3Q92796 817 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 HDAC10Q969S8 669 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 FKBP10Q96AY3 582 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 ENAMQ9NRM1 1142 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 IRAK4Q9NWZ3 460 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 SLC2A6Q9UGQ3 507 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 AMFRQ9UKV5 643 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 RIMKLBQ9ULI2 386 aa15.32■□□□□ 0.04
SCFD1-224ENST00000557713 HIVEP3Q5T1R4 2406 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 HEATR9A2RTY3 570 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 SUN1O94901 812 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 GOT2P00505 430 aaKnown RBP15.31■□□□□ 0.04
SCFD1-224ENST00000557713 ALBP02768 609 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 PTMAP06454 111 aaKnown RBP15.31■□□□□ 0.04
SCFD1-224ENST00000557713 GLRBP48167 497 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 ACVR1Q04771 509 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 NKG7Q16617 165 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 TSTD2Q5T7W7 516 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 FCRL6Q6DN72 434 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 IGFL2Q6UWQ7 119 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 ZNF534Q76KX8 674 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 PEX26Q7Z412 305 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 DNAAF3Q8N9W5 541 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 OR4L1Q8NH43 312 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 DENND1AQ8TEH3 1009 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 ZNF778Q96MU6 729 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 TTC1Q99614 292 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 CARD6Q9BX69 1037 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 SLC26A1Q9H2B4 701 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 WDR54Q9H977 334 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 SLC6A20Q9NP91 592 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 PACSIN2Q9UNF0 486 aaPredicted RBP15.31■□□□□ 0.04
SCFD1-224ENST00000557713 DOPEY1Q5JWR5 2465 aa15.31■□□□□ 0.04
SCFD1-224ENST00000557713 A0A1B0GX78 115 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 ERI2A8K979 691 aaKnown RBP15.3■□□□□ 0.04
SCFD1-224ENST00000557713 MIF4GDA9UHW6 222 aaKnown RBP15.3■□□□□ 0.04
SCFD1-224ENST00000557713 F8W8V4 182 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 SOCS6O14544 535 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 PRICKLE3O43900 615 aaPredicted RBP15.3■□□□□ 0.04
SCFD1-224ENST00000557713 IPO7O95373 1038 aaKnown RBP15.3■□□□□ 0.04
SCFD1-224ENST00000557713 S1PR4O95977 384 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 PIM1P11309 404 aaPredicted RBP15.3■□□□□ 0.04
SCFD1-224ENST00000557713 ITGA3P26006 1051 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 STIP1P31948 543 aaKnown RBP15.3■□□□□ 0.04
SCFD1-224ENST00000557713 DCTP40126 519 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 GRIA1P42261 906 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 HSPA14Q0VDF9 509 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 SEMA3AQ14563 771 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 ITPR2Q14571 2701 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 PRAMEF13Q5VWM6 474 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 AFTPHQ6ULP2 937 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 UNC5DQ6UXZ4 953 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 COX15Q7KZN9 410 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 C2orf73Q8N5S3 287 aaPredicted RBP15.3■□□□□ 0.04
SCFD1-224ENST00000557713 UBL4BQ8N7F7 174 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 ACRBPQ8NEB7 543 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 OR2L8Q8NGY9 312 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 LKAAEAR1Q8TD35 194 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 UBE2Q2Q8WVN8 375 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 ASZ1Q8WWH4 475 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 SLC22A18Q96BI1 424 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 C5orf34Q96MH7 638 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 ZNF285Q96NJ3 590 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 IL17FQ96PD4 163 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 SPSB2Q99619 263 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 ETNK1Q9HBU6 452 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 CIDEBQ9UHD4 219 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 FBXL4Q9UKA2 621 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 CSAG2Q9Y5P2 127 aa15.3■□□□□ 0.04
SCFD1-224ENST00000557713 IQCF5A8MTL0 148 aa15.29■□□□□ 0.04
SCFD1-224ENST00000557713 DSCR3O14972 297 aa15.29■□□□□ 0.04
SCFD1-224ENST00000557713 SLCO2B1O94956 709 aa15.29■□□□□ 0.04
SCFD1-224ENST00000557713 RPN2P04844 631 aa15.29■□□□□ 0.04
SCFD1-224ENST00000557713 ADRA1DP25100 572 aa15.29■□□□□ 0.04
SCFD1-224ENST00000557713 GRIA3P42263 894 aa15.29■□□□□ 0.04
SCFD1-224ENST00000557713 ELOAQ14241 798 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms