RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 SPESP1Q6UW49 350 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 TIFABQ6ZNK6 161 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 TMPRSS9Q7Z410 1059 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 B3GNT8Q7Z7M8 397 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 TBC1D1Q86TI0 1168 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-234ENST00000557703 CAVIN3Q969G5 261 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 ZUFSPQ96AP4 578 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 ZNF578Q96N58 590 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-234ENST00000557703 SLC46A1Q96NT5 459 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 TGM7Q96PF1 710 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 DHRS4Q9BTZ2 278 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 NMRAL1Q9HBL8 299 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 ACTR10Q9NZ32 417 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 ACSL6Q9UKU0 697 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 BTRCQ9Y297 605 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 ACOT9Q9Y305 439 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 PCDHGA3Q9Y5H0 932 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 NFS1Q9Y697 457 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 AHCTF1Q8WYP5 2266 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 CHD8Q9HCK8 2581 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 PCM1Q15154 2024 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 IQANK1A0A1B0GTG1 560 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 GSAPA4D1B5 854 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 TRABD2BA6NFA1 517 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 BTN3A3O00478 584 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 BTN3A1O00481 513 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 CCNDBP1O95273 360 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 MPOP05164 745 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 TPBGLP0DKB5 382 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 MYBL2P10244 700 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 POLR2CP19387 275 aaPredicted RBP13.24□□□□□ -0.29
SHMT2-234ENST00000557703 OAS2P29728 719 aaKnown RBP13.24□□□□□ -0.29
SHMT2-234ENST00000557703 ARL4DP49703 201 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 SERPINB8P50452 374 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 CSRP3P50461 194 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 VSNL1P62760 191 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 MC2RQ01718 297 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 RELAQ04206 551 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 FAM83EQ2M2I3 478 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 ERCC6LQ2NKX8 1250 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 RAPH1Q70E73 1250 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 PIWIL4Q7Z3Z4 852 aaKnown RBP13.24□□□□□ -0.29
SHMT2-234ENST00000557703 TDRPQ86YL5 185 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 CEP97Q8IW35 865 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 D2HGDHQ8N465 521 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 MREGQ8N565 214 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 LMNTD1Q8N9Z9 388 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 RHEBL1Q8TAI7 183 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 TCTN2Q96GX1 697 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 TAAR9Q96RI9 348 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 DDA1Q9BW61 102 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 PARD6BQ9BYG5 372 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 THSD1Q9NS62 852 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 ANKMY1Q9P2S6 941 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 PDE10AQ9Y233 779 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 LOXL2Q9Y4K0 774 aa13.24□□□□□ -0.29
SHMT2-234ENST00000557703 COL27A1Q8IZC6 1860 aaPredicted RBP13.24□□□□□ -0.29
SHMT2-234ENST00000557703 A0A0J9YY10 115 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 FAM149AA5PLN7 773 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 PRICKLE3O43900 615 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-234ENST00000557703 SLC16A8O95907 504 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 NUDT17P0C025 328 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 CCDC166P0CW27 439 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 SAT1P21673 171 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 CDH3P22223 829 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 TYK2P29597 1187 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 ABCG1P45844 678 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 KPNA2P52292 529 aaKnown RBP13.23□□□□□ -0.29
SHMT2-234ENST00000557703 PNLIPRP1P54315 467 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 GFERP55789 205 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 ABATP80404 500 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 MROH9Q5TGP6 573 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 KLC3Q6P597 504 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 FBXO38Q6PIJ6 1188 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 TMEM207Q6UWW9 146 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 CEACAM20Q6UY09 585 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 CLEC14AQ86T13 490 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 TCAIMQ8N3R3 496 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 STAG3L4Q8TBR4 150 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 ACMSDQ8TDX5 336 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 AENQ8WTP8 325 aaKnown RBP13.23□□□□□ -0.29
SHMT2-234ENST00000557703 GATA6Q92908 595 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 KIAA1191Q96A73 305 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 PKNOX2Q96KN3 472 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 OR2A14Q96R47 310 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 MAP3K3Q99759 626 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 ROPN1BQ9BZX4 212 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-234ENST00000557703 ROPN1Q9HAT0 212 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-234ENST00000557703 PDE7BQ9NP56 450 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 PSMC3IPQ9P2W1 217 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-234ENST00000557703 CTNNAL1Q9UBT7 734 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 SATB2Q9UPW6 733 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 OARD1Q9Y530 152 aa13.23□□□□□ -0.29
SHMT2-234ENST00000557703 SYCE1LA8MT33 242 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 CDRT15L2A8MXV6 281 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 ISM1B1AKI9 464 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 E7ENX8 843 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 CDH16O75309 829 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 ERLIN1O75477 346 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 PIAS1O75925 651 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms