RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 NTMT1Q9BV86 223 aa17.28■□□□□ 0.36
XRCC3-218ENST00000557439 CCDC90BQ9GZT6 254 aa17.28■□□□□ 0.36
XRCC3-218ENST00000557439 WARS2Q9UGM6 360 aaKnown RBP17.28■□□□□ 0.36
XRCC3-218ENST00000557439 CORINQ9Y5Q5 1042 aa17.28■□□□□ 0.36
XRCC3-218ENST00000557439 TRBV5-3A0A0A0MS03 114 aa17.28■□□□□ 0.36
XRCC3-218ENST00000557439 ZNF701M0R085 212 aaPredicted RBP17.28■□□□□ 0.36
XRCC3-218ENST00000557439 ZBTB11O95625 1053 aaPredicted RBP17.28■□□□□ 0.36
XRCC3-218ENST00000557439 IL6P05231 212 aa17.28■□□□□ 0.36
XRCC3-218ENST00000557439 PLA2G16P53816 162 aa17.28■□□□□ 0.36
XRCC3-218ENST00000557439 BOP1Q14137 746 aaKnown RBP17.28■□□□□ 0.36
XRCC3-218ENST00000557439 C6orf141Q5SZD1 244 aa17.28■□□□□ 0.36
XRCC3-218ENST00000557439 NEK5Q6P3R8 708 aa17.28■□□□□ 0.36
XRCC3-218ENST00000557439 ZNF420Q8TAQ5 688 aaPredicted RBP17.28■□□□□ 0.36
XRCC3-218ENST00000557439 PNPT1Q8TCS8 783 aaKnown RBP17.28■□□□□ 0.36
XRCC3-218ENST00000557439 FOXJ1Q92949 421 aa17.28■□□□□ 0.36
XRCC3-218ENST00000557439 USP7Q93009 1102 aa17.28■□□□□ 0.36
XRCC3-218ENST00000557439 C2orf49Q9BVC5 232 aaPredicted RBP17.28■□□□□ 0.36
XRCC3-218ENST00000557439 DCAF13Q9NV06 445 aaKnown RBP17.28■□□□□ 0.36
XRCC3-218ENST00000557439 DNAAF2Q9NVR5 837 aaKnown RBP17.28■□□□□ 0.36
XRCC3-218ENST00000557439 BACE2Q9Y5Z0 518 aa17.28■□□□□ 0.36
XRCC3-218ENST00000557439 WDR47O94967 919 aa17.27■□□□□ 0.36
XRCC3-218ENST00000557439 ZNF682O95780 498 aa17.27■□□□□ 0.36
XRCC3-218ENST00000557439 CA8P35219 290 aa17.27■□□□□ 0.36
XRCC3-218ENST00000557439 VEPH1Q14D04 833 aa17.27■□□□□ 0.36
XRCC3-218ENST00000557439 RETSATQ6NUM9 610 aa17.27■□□□□ 0.36
XRCC3-218ENST00000557439 MACC1Q6ZN28 852 aa17.27■□□□□ 0.36
XRCC3-218ENST00000557439 PRR23BQ6ZRT6 265 aa17.27■□□□□ 0.36
XRCC3-218ENST00000557439 UBE2R2Q712K3 238 aaPredicted RBP17.27■□□□□ 0.36
XRCC3-218ENST00000557439 LEMD2Q8NC56 503 aa17.27■□□□□ 0.36
XRCC3-218ENST00000557439 ASIC4Q96FT7 647 aa17.27■□□□□ 0.36
XRCC3-218ENST00000557439 CPPED1Q9BRF8 314 aaPredicted RBP17.27■□□□□ 0.36
XRCC3-218ENST00000557439 RHNO1Q9BSD3 238 aa17.27■□□□□ 0.36
XRCC3-218ENST00000557439 BBS2Q9BXC9 721 aa17.27■□□□□ 0.36
XRCC3-218ENST00000557439 TRPS1Q9UHF7 1281 aa17.27■□□□□ 0.36
XRCC3-218ENST00000557439 STOML2Q9UJZ1 356 aa17.27■□□□□ 0.36
XRCC3-218ENST00000557439 C5orf42Q9H799 3197 aa17.27■□□□□ 0.36
XRCC3-218ENST00000557439 ABCB7O75027 752 aa17.27■□□□□ 0.35
XRCC3-218ENST00000557439 EFEMP2O95967 443 aa17.27■□□□□ 0.35
XRCC3-218ENST00000557439 CKMP06732 381 aa17.27■□□□□ 0.35
XRCC3-218ENST00000557439 CCNA2P20248 432 aa17.27■□□□□ 0.35
XRCC3-218ENST00000557439 MSH3P20585 1137 aa17.27■□□□□ 0.35
XRCC3-218ENST00000557439 S100A3P33764 101 aa17.27■□□□□ 0.35
XRCC3-218ENST00000557439 GTF2H3Q13889 308 aa17.27■□□□□ 0.35
XRCC3-218ENST00000557439 ZNF648Q5T619 568 aaPredicted RBP17.27■□□□□ 0.35
XRCC3-218ENST00000557439 DOK6Q6PKX4 331 aa17.27■□□□□ 0.35
XRCC3-218ENST00000557439 BEND7Q8N7W2 519 aaPredicted RBP17.27■□□□□ 0.35
XRCC3-218ENST00000557439 GIPC3Q8TF64 312 aa17.27■□□□□ 0.35
XRCC3-218ENST00000557439 HTATIP2Q9BUP3 242 aa17.27■□□□□ 0.35
XRCC3-218ENST00000557439 CFAP97Q9P2B7 532 aa17.27■□□□□ 0.35
XRCC3-218ENST00000557439 ABCG2Q9UNQ0 655 aa17.27■□□□□ 0.35
XRCC3-218ENST00000557439 ERVK-11Q9UQG0 969 aa17.27■□□□□ 0.35
XRCC3-218ENST00000557439 SLC22A14Q9Y267 594 aa17.27■□□□□ 0.35
XRCC3-218ENST00000557439 SH3PXD2BA1X283 911 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 SEC14L2O76054 403 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 INMTO95050 263 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 ANXA5P08758 320 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 SDC1P18827 310 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 GZMMP51124 257 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 BMXP51813 675 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 AQP6Q13520 282 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 SIM2Q14190 667 aaPredicted RBP17.26■□□□□ 0.35
XRCC3-218ENST00000557439 PTCHD3Q3KNS1 767 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 CARD16Q5EG05 197 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 Q6ZNB5 142 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 CEP68Q76N32 757 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 PIWIL3Q7Z3Z3 882 aaKnown RBP17.26■□□□□ 0.35
XRCC3-218ENST00000557439 GPR149Q86SP6 731 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 HS6ST3Q8IZP7 471 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 CMTM8Q8IZV2 173 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 ZNF555Q8NEP9 628 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 ELOVL6Q9H5J4 265 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 TMEM45AQ9NWC5 275 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 TMEFF2Q9UIK5 374 aaPredicted RBP17.26■□□□□ 0.35
XRCC3-218ENST00000557439 TMPRSS11EQ9UL52 423 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 LOC100130705A0A1B0GUX0 176 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 PER2O15055 1255 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 FTH1P02794 183 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 PTPN6P29350 595 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 PTSQ03393 145 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 MAD2L1Q13257 205 aaPredicted RBP17.26■□□□□ 0.35
XRCC3-218ENST00000557439 ZNF783Q6ZMS7 281 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 EGFL6Q8IUX8 553 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 CHPFQ8IZ52 775 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 OR7A2PQ8NGA2 310 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 DPH2Q9BQC3 489 aaPredicted RBP17.26■□□□□ 0.35
XRCC3-218ENST00000557439 ATP13A3Q9H7F0 1226 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 IL21Q9HBE4 155 aa17.26■□□□□ 0.35
XRCC3-218ENST00000557439 hCG_2039718K7EN88 272 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 GFRA2O00451 464 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 NOL3O60936 208 aaKnown RBP17.25■□□□□ 0.35
XRCC3-218ENST00000557439 RAPSNQ13702 412 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 DDX39BQ13838 428 aaKnown RBP17.25■□□□□ 0.35
XRCC3-218ENST00000557439 SPCS2Q15005 226 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 LAIR1Q6GTX8 287 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 ADNP2Q6IQ32 1131 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 GALNT18Q6P9A2 607 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 VTCN1Q7Z7D3 282 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 RNF168Q8IYW5 571 aaPredicted RBP17.25■□□□□ 0.35
XRCC3-218ENST00000557439 SLC15A4Q8N697 577 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 YTHDF1Q9BYJ9 559 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms