RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 RAB42Q8N4Z0 105 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 MAPKAPK5-AS1Q8N8E1 139 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 ZFAND2BQ8WV99 257 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 DYRK2Q92630 601 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 OMA1Q96E52 524 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 TESK2Q96S53 571 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 PIGQQ9BRB3 760 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 FUCA2Q9BTY2 467 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 MUC13Q9H3R2 512 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 A4GALTQ9NPC4 353 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 DIAPH3Q9NSV4 1193 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 ERAP1Q9NZ08 941 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 AMACRQ9UHK6 382 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 CORO1CQ9ULV4 474 aaPredicted RBP3.56□□□□□ -1.84
VRK1-207ENST00000557352 NALCNQ8IZF0 1738 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 FMN2Q9NZ56 1722 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 TULP4Q9NRJ4 1543 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 ADAMTS13Q76LX8 1427 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 YTHDC2Q9H6S0 1430 aaKnown RBP3.55□□□□□ -1.84
VRK1-207ENST00000557352 LRPPRCP42704 1394 aaKnown RBP3.55□□□□□ -1.84
VRK1-207ENST00000557352 ABCC11Q96J66 1382 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 ADAMTS9Q9P2N4 1935 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 FRMD3A2A2Y4 597 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.55□□□□□ -1.84
VRK1-207ENST00000557352 CCER2I3L3R5 266 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 RNASEH2AO75792 299 aaKnown RBP3.55□□□□□ -1.84
VRK1-207ENST00000557352 CLDN1O95832 211 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 B3GALT5-AS1P59052 145 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 PRAMEP78395 509 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 PRKCZQ05513 592 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 DRP2Q13474 957 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 GRAPQ13588 217 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 TAF13Q15543 124 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 BSPRYQ5W0U4 402 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 KIAA0930Q6ICG6 404 aaPredicted RBP3.55□□□□□ -1.84
VRK1-207ENST00000557352 ZNF774Q6NX45 483 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 PAQR6Q6TCH4 344 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 LRRTM1Q86UE6 522 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 TICAM1Q8IUC6 712 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 LMNTD2Q8IXW0 634 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 TDRD7Q8NHU6 1098 aaKnown RBP3.55□□□□□ -1.84
VRK1-207ENST00000557352 MTERF3Q96E29 417 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 CMTM3Q96MX0 182 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 C7orf26Q96N11 449 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 FOXN4Q96NZ1 517 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 C1QTNF1Q9BXJ1 281 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 SH2D4AQ9H788 454 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 ATP13A3Q9H7F0 1226 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 KAT14Q9H8E8 782 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 GTF2A1LQ9UNN4 478 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 SESN1Q9Y6P5 492 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 XIRP1Q702N8 1843 aaKnown RBP3.55□□□□□ -1.84
VRK1-207ENST00000557352 STRCQ7RTU9 1775 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.55□□□□□ -1.84
VRK1-207ENST00000557352 CDC42BPGQ6DT37 1551 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 NRKQ7Z2Y5 1582 aa3.55□□□□□ -1.84
VRK1-207ENST00000557352 LRRC7Q96NW7 1537 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 INSRP06213 1382 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 ASTN2O75129 1339 aaPredicted RBP3.54□□□□□ -1.84
VRK1-207ENST00000557352 A0A1W2PR77 199 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 CREB3O43889 395 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 TPPPO94811 219 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 OR2C1O95371 312 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 PON1P27169 355 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 PPARGP37231 505 aaPredicted RBP3.54□□□□□ -1.84
VRK1-207ENST00000557352 HNF4AP41235 474 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 TMF1P82094 1093 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 G3BP1Q13283 466 aaKnown RBP eCLIP3.54□□□□□ -1.84
VRK1-207ENST00000557352 MELKQ14680 651 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 C2CD6Q53TS8 623 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 CDC20BQ86Y33 519 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 ERC1Q8IUD2 1116 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 LACC1Q8IV20 430 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 TEX11Q8IYF3 940 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 MARVELD2Q8N4S9 558 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 OR5AP2Q8NGF4 316 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 RNF128Q8TEB7 428 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 SLC26A6Q9BXS9 759 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 VN1R1Q9GZP7 353 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 ARRDC1-AS1Q9H2J1 176 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 SDR39U1Q9NRG7 319 aaPredicted RBP3.54□□□□□ -1.84
VRK1-207ENST00000557352 FBXL17Q9UF56 701 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 OSGIN1Q9UJX0 560 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 ATP7BP35670 1465 aa3.54□□□□□ -1.84
VRK1-207ENST00000557352 CENPJQ9HC77 1338 aaPredicted RBP3.53□□□□□ -1.84
VRK1-207ENST00000557352 MEX3AA1L020 520 aaKnown RBP3.53□□□□□ -1.84
VRK1-207ENST00000557352 RSL1D1O76021 490 aaKnown RBP3.53□□□□□ -1.84
VRK1-207ENST00000557352 ZSCAN5DPP0CG00 497 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 GABRB1P18505 474 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 UGT1A4P22310 534 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 CA6P23280 308 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 RIGQ13278 110 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 NECTIN1Q15223 517 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 DLG2Q15700 870 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 HLA-BQ31612 363 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 MDH1BQ5I0G3 518 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 CERS3Q8IU89 383 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 NAXEQ8NCW5 288 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 ERLEC1Q96DZ1 483 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 NSMCE3Q96MG7 304 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms