RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 Q8NA96 180 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 CLEC1AQ8NC01 280 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 PPHLN1Q8NEY8 458 aaKnown RBP15.29■□□□□ 0.04
TUBB3-213ENST00000557262 OR2Y1Q8NGV0 311 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 CFAP61Q8NHU2 1237 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 DENND1AQ8TEH3 1009 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 PNPLA2Q96AD5 504 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 MENTQ9BUN1 341 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 CHRAC1Q9NRG0 131 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.29■□□□□ 0.04
TUBB3-213ENST00000557262 PAK5Q9P286 719 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 GUCA1BQ9UMX6 200 aa15.29■□□□□ 0.04
TUBB3-213ENST00000557262 PRMT5O14744 637 aaPredicted RBP15.28■□□□□ 0.04
TUBB3-213ENST00000557262 SLCO2B1O94956 709 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 AGFG2O95081 481 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 S1PR4O95977 384 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 ATXN8OSP0DMR3 200 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 MAGP20916 626 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 ALAS2P22557 587 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 AOAHP28039 575 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 TTPAP49638 278 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 ARSFP54793 590 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 RAPSNQ13702 412 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 DCAF10Q5QP82 559 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 VWA5B1Q5TIE3 1220 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 UNC5DQ6UXZ4 953 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 LDB1Q86U70 411 aaPredicted RBP15.28■□□□□ 0.04
TUBB3-213ENST00000557262 DCUN1D3Q8IWE4 304 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 C2orf73Q8N5S3 287 aaPredicted RBP15.28■□□□□ 0.04
TUBB3-213ENST00000557262 LINC01555Q8NAE3 123 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 SPC24Q8NBT2 197 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 OR2L8Q8NGY9 312 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 DLG3Q92796 817 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 TSGA10Q9BZW7 698 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 CATSPERZQ9NTU4 200 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 INTS7Q9NVH2 962 aaKnown RBP15.28■□□□□ 0.04
TUBB3-213ENST00000557262 P4HTMQ9NXG6 502 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 LUZP4Q9P127 313 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 DRG1Q9Y295 367 aaKnown RBP15.28■□□□□ 0.04
TUBB3-213ENST00000557262 KLHL20Q9Y2M5 609 aa15.28■□□□□ 0.04
TUBB3-213ENST00000557262 KPNA5O15131 536 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 CD3EAPO15446 510 aaKnown RBP15.27■□□□□ 0.04
TUBB3-213ENST00000557262 KRT86O43790 486 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 CNOT3O75175 753 aaKnown RBP15.27■□□□□ 0.04
TUBB3-213ENST00000557262 CDC25BP30305 580 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 RPL22P35268 128 aaKnown RBP15.27■□□□□ 0.04
TUBB3-213ENST00000557262 NPY2RP49146 381 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 SOX8P57073 446 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 GRB7Q14451 532 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 MYBPC3Q14896 1274 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 SLC9A5Q14940 896 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 TMED2Q15363 201 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 SF1Q15637 639 aaKnown RBP15.27■□□□□ 0.04
TUBB3-213ENST00000557262 CCNG2Q16589 344 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 PLEKHN1Q494U1 663 aaPredicted RBP15.27■□□□□ 0.04
TUBB3-213ENST00000557262 ZC3H12BQ5HYM0 836 aaKnown RBP15.27■□□□□ 0.04
TUBB3-213ENST00000557262 PTRHD1Q6GMV3 140 aaKnown RBP15.27■□□□□ 0.04
TUBB3-213ENST00000557262 TTC23LQ6PF05 361 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 FIGLAQ6QHK4 219 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 KRT222Q8N1A0 295 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 GALNT16Q8N428 558 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 LMNTD1Q8N9Z9 388 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 LKAAEAR1Q8TD35 194 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 NACC2Q96BF6 587 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 ATP13A2Q9NQ11 1180 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 MARCH4Q9P2E8 410 aaPredicted RBP15.27■□□□□ 0.04
TUBB3-213ENST00000557262 SLC39A10Q9ULF5 831 aa15.27■□□□□ 0.04
TUBB3-213ENST00000557262 PCSK5Q92824 1860 aa15.27■□□□□ 0.03
TUBB3-213ENST00000557262 PRRC2CQ9Y520 2896 aaKnown RBP15.26■□□□□ 0.03
TUBB3-213ENST00000557262 TCP11X1B4DZS4 312 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 RASGRF2O14827 1237 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 FKBP9O95302 570 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 ONECUT2O95948 504 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 ALPPP05187 535 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 UMODP07911 640 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 ZSCAN5DPP0CG00 497 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 PIM1P11309 404 aaPredicted RBP15.26■□□□□ 0.03
TUBB3-213ENST00000557262 GCGRP47871 477 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 SESN2P58004 480 aaPredicted RBP15.26■□□□□ 0.03
TUBB3-213ENST00000557262 RPS6KA1Q15418 735 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 PRR30Q53SZ7 412 aaPredicted RBP15.26■□□□□ 0.03
TUBB3-213ENST00000557262 MEI1Q5TIA1 1274 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 IGFL3Q6UXB1 125 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 C4orf22Q6V702 233 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 TTLL10Q6ZVT0 673 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 OVCH1Q7RTY7 1134 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 GSDMBQ8TAX9 411 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 ZUFSPQ96AP4 578 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 RAD51AP1Q96B01 352 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 IL17FQ96PD4 163 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 PANX3Q96QZ0 392 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 SLC29A3Q9BZD2 475 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 P2RY12Q9H244 342 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 ZNF552Q9H707 407 aaPredicted RBP15.26■□□□□ 0.03
TUBB3-213ENST00000557262 EIF2B3Q9NR50 452 aaKnown RBP15.26■□□□□ 0.03
TUBB3-213ENST00000557262 SLC22A11Q9NSA0 550 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 MAP10Q9P2G4 905 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 CIDEBQ9UHD4 219 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 MRFAP1Q9Y605 127 aa15.26■□□□□ 0.03
TUBB3-213ENST00000557262 CCDC88CQ9P219 2028 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms