RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 ARL15Q9NXU5 204 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 KCNK4Q9NYG8 393 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 OGFRQ9NZT2 677 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 STOX2Q9P2F5 926 aaPredicted RBP16.88■□□□□ 0.29
TUBB3-211ENST00000556536 ACTL7BQ9Y614 415 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 ZZEF1O43149 2961 aa16.88■□□□□ 0.29
TUBB3-211ENST00000556536 ARID1BQ8NFD5 2236 aaPredicted RBP16.88■□□□□ 0.29
TUBB3-211ENST00000556536 ZFC3H1O60293 1989 aaKnown RBP16.88■□□□□ 0.29
TUBB3-211ENST00000556536 PKD1L2Q7Z442 2459 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 OR6C74A6NCV1 312 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 TARM1B6A8C7 271 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 BTN3A3O00478 584 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 TNFSF14O43557 240 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 PROS1P07225 676 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 MTHFD2P13995 350 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 PNLIPP16233 465 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 TYRP1P17643 537 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 ACP1P24666 158 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 IMPA1P29218 277 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 GPR3P46089 330 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 ACADVLP49748 655 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 RAB28P51157 221 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 KPNA2P52292 529 aaKnown RBP16.87■□□□□ 0.29
TUBB3-211ENST00000556536 AP1S2P56377 157 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 FASTKQ14296 549 aaKnown RBP16.87■□□□□ 0.29
TUBB3-211ENST00000556536 ZXDCQ2QGD7 858 aaPredicted RBP16.87■□□□□ 0.29
TUBB3-211ENST00000556536 C18orf21Q32NC0 220 aaPredicted RBP16.87■□□□□ 0.29
TUBB3-211ENST00000556536 NKAIN2Q5VXU1 208 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 SPRED1Q7Z699 444 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 LINC01555Q8NAE3 123 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 ZNF480Q8WV37 535 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 ALKBH8Q96BT7 664 aaKnown RBP16.87■□□□□ 0.29
TUBB3-211ENST00000556536 ATP6V1G3Q96LB4 118 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 MRPL46Q9H2W6 279 aaKnown RBP16.87■□□□□ 0.29
TUBB3-211ENST00000556536 ACBD3Q9H3P7 528 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 SRMSQ9H3Y6 488 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 EVA1BQ9NVM1 165 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 SPATA7Q9P0W8 599 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 SLC17A7Q9P2U7 560 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 GRID1Q9ULK0 1009 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 SPEGQ15772 3267 aa16.87■□□□□ 0.29
TUBB3-211ENST00000556536 ARHGEF17Q96PE2 2063 aaPredicted RBP16.87■□□□□ 0.29
TUBB3-211ENST00000556536 IGHV1OR21-1A0A087WYE8 117 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 CCDC189A1A4V9 331 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 PABPN1LA6NDY0 278 aaKnown RBP16.86■□□□□ 0.29
TUBB3-211ENST00000556536 SUPT3HB4E1H0 165 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 ATP8B1O43520 1251 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 PLIN3O60664 434 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 SUPT3HO75486 399 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 UBXN7O94888 489 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 PROCP04070 461 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 ERGP11308 486 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 SHMT2P34897 504 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 PNLIPRP1P54315 467 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 EPHA4P54764 986 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 CCL7P80098 99 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 CDKL1Q00532 357 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 MPP2Q14168 576 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 TRIP6Q15654 476 aaKnown RBP16.86■□□□□ 0.29
TUBB3-211ENST00000556536 CYP2A13Q16696 494 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 AMZ1Q400G9 498 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 ADGRF3Q8IZF5 1079 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 GOLGA6L1Q8N7Z2 621 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 PPFIBP2Q8ND30 876 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 OR2L8Q8NGY9 312 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 TCP10LQ8TDR4 215 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 RSC1A1Q92681 617 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 RHBDF1Q96CC6 855 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 FBXL8Q96CD0 374 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 EGFL8Q99944 293 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 SSU72Q9NP77 194 aaKnown RBP16.86■□□□□ 0.29
TUBB3-211ENST00000556536 SPHK1Q9NYA1 384 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 NUDT4Q9NZJ9 180 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 CD274Q9NZQ7 290 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 PLLPQ9Y342 182 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 CEP295Q9C0D2 2601 aa16.86■□□□□ 0.29
TUBB3-211ENST00000556536 ASCC3Q8N3C0 2202 aaKnown RBP16.85■□□□□ 0.29
TUBB3-211ENST00000556536 SYCE1LA8MT33 242 aa16.85■□□□□ 0.29
TUBB3-211ENST00000556536 TAPBPO15533 448 aa16.85■□□□□ 0.29
TUBB3-211ENST00000556536 KDM1AO60341 852 aa16.85■□□□□ 0.29
TUBB3-211ENST00000556536 ANXA5P08758 320 aa16.85■□□□□ 0.29
TUBB3-211ENST00000556536 CD1CP29017 333 aa16.85■□□□□ 0.29
TUBB3-211ENST00000556536 PEBP1P30086 187 aaKnown RBP16.85■□□□□ 0.29
TUBB3-211ENST00000556536 RPA3P35244 121 aaPredicted RBP16.85■□□□□ 0.29
TUBB3-211ENST00000556536 CFHR1Q03591 330 aa16.85■□□□□ 0.29
TUBB3-211ENST00000556536 FBXO48Q5FWF7 155 aa16.85■□□□□ 0.29
TUBB3-211ENST00000556536 ANKS6Q68DC2 871 aa16.85■□□□□ 0.29
TUBB3-211ENST00000556536 AGTRAPQ6RW13 159 aa16.85■□□□□ 0.29
TUBB3-211ENST00000556536 TAX1BP1Q86VP1 789 aa16.85■□□□□ 0.29
TUBB3-211ENST00000556536 LRRC56Q8IYG6 542 aaPredicted RBP16.85■□□□□ 0.29
TUBB3-211ENST00000556536 PDPRQ8NCN5 879 aa16.85■□□□□ 0.29
TUBB3-211ENST00000556536 OR10G6Q8NH81 332 aa16.85■□□□□ 0.29
TUBB3-211ENST00000556536 TWSG1Q9GZX9 223 aa16.85■□□□□ 0.29
TUBB3-211ENST00000556536 ATG10Q9H0Y0 220 aa16.85■□□□□ 0.29
TUBB3-211ENST00000556536 TOR4AQ9NXH8 423 aa16.85■□□□□ 0.29
TUBB3-211ENST00000556536 OR6C2Q9NZP2 312 aa16.85■□□□□ 0.29
TUBB3-211ENST00000556536 LNPEPQ9UIQ6 1025 aa16.85■□□□□ 0.29
TUBB3-211ENST00000556536 COL5A1P20908 1838 aaPredicted RBP16.84■□□□□ 0.29
TUBB3-211ENST00000556536 A0A1W2PQM1 296 aa16.84■□□□□ 0.29
TUBB3-211ENST00000556536 FAM221BA6H8Z2 402 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms