RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 MRPS2Q9Y399 296 aaKnown RBP13.35□□□□□ -0.27
ACTN1-219ENST00000556432 NEU2Q9Y3R4 380 aa13.35□□□□□ -0.27
ACTN1-219ENST00000556432 MAU2Q9Y6X3 613 aa13.35□□□□□ -0.27
ACTN1-219ENST00000556432 ABCA2Q9BZC7 2435 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 NSG1A0A0A6YYJ2 146 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 C3orf70A6NLC5 250 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-219ENST00000556432 KDM1AO60341 852 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 CLDN14O95500 239 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 AGTP01019 485 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 MCM3P25205 808 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 NSG1P42857 185 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 CARSP49589 748 aaKnown RBP13.34□□□□□ -0.27
ACTN1-219ENST00000556432 OCA2Q04671 838 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 GRM7Q14831 915 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 BRD3Q15059 726 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 C3AR1Q16581 482 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 CNSTQ6PJW8 725 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 RBM43Q6ZSC3 357 aaKnown RBP13.34□□□□□ -0.27
ACTN1-219ENST00000556432 OR13C4Q8NGS5 318 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 DNAJB8Q8NHS0 232 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 FLVCR1-AS1Q8TAF5 88 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 C14orf79Q96F83 325 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 FCRL5Q96RD9 977 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 MCCC2Q9HCC0 563 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 POLG2Q9UHN1 485 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 C3orf18Q9UK00 162 aa13.34□□□□□ -0.27
ACTN1-219ENST00000556432 NIPBLQ6KC79 2804 aaeCLIP13.34□□□□□ -0.27
ACTN1-219ENST00000556432 ANKHD1Q8IWZ3 2542 aaKnown RBP13.34□□□□□ -0.27
ACTN1-219ENST00000556432 CACNA1CQ13936 2221 aa13.33□□□□□ -0.27
ACTN1-219ENST00000556432 C5orf60A6NFR6 353 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 CCL22O00626 93 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 WFS1O76024 890 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 CRTAMO95727 393 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 H2AFZP0C0S5 128 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 PRR35P0CG20 571 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 MYBL2P10244 700 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 AGAP20933 346 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 KIR3DL1P43629 444 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 RAB28P51157 221 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 XIAPP98170 497 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 KLC1Q07866 573 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 KIR2DS3Q14952 304 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 SYTL3Q4VX76 610 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 H2AFVQ71UI9 128 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 TAS2R42Q7RTR8 314 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 SNX20Q7Z614 316 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 VSIG1Q86XK7 387 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 TBC1D21Q8IYX1 336 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 ZNF567Q8N184 647 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 CLDN19Q8N6F1 224 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 MIEF2Q96C03 454 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 SELENOSQ9BQE4 189 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 APOL2Q9BQE5 337 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 ZDHHC3Q9NYG2 299 aa13.33□□□□□ -0.28
ACTN1-219ENST00000556432 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.33□□□□□ -0.28
ACTN1-219ENST00000556432 FAM227AF5H4B4 570 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 FANCGO15287 622 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 SNRNP200O75643 2136 aaKnown RBP13.32□□□□□ -0.28
ACTN1-219ENST00000556432 WDPCPO95876 746 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 PECAM1P16284 738 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-219ENST00000556432 FDXRP22570 491 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 SOX11P35716 441 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 GRIA3P42263 894 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 NR2C2P49116 596 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 ART1P52961 327 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 GEMP55040 296 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 PMP22Q01453 160 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 EEF1A2Q05639 463 aaKnown RBP13.32□□□□□ -0.28
ACTN1-219ENST00000556432 CDSNQ15517 529 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 ZNF658BQ4V348 819 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-219ENST00000556432 TCTE1Q5JU00 501 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 YOD1Q5VVQ6 348 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-219ENST00000556432 KAZNQ674X7 775 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 MEX3BQ6ZN04 569 aaKnown RBP13.32□□□□□ -0.28
ACTN1-219ENST00000556432 ARHGEF18Q6ZSZ5 1173 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 TAX1BP1Q86VP1 789 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 DTWD1Q8N5C7 304 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 C2orf73Q8N5S3 287 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-219ENST00000556432 ELMO1Q92556 727 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 SYN2Q92777 582 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-219ENST00000556432 HAS2Q92819 552 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 VAT1Q99536 393 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 PACSIN1Q9BY11 444 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 NAT10Q9H0A0 1025 aaKnown RBP13.32□□□□□ -0.28
ACTN1-219ENST00000556432 GPAMQ9HCL2 828 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 INTS7Q9NVH2 962 aaKnown RBP13.32□□□□□ -0.28
ACTN1-219ENST00000556432 IL1RAPL1Q9NZN1 696 aa13.32□□□□□ -0.28
ACTN1-219ENST00000556432 VSTM2BA6NLU5 285 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 LIN7AO14910 233 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-219ENST00000556432 PRAMEF2O60811 474 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 ONECUT2O95948 504 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 SERPINA7P05543 415 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 ZGLP1P0C6A0 271 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 CXCR2P25025 360 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 ACRV1P26436 265 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 PEBP1P30086 187 aaKnown RBP13.31□□□□□ -0.28
ACTN1-219ENST00000556432 MC4RP32245 332 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 GCGRP47871 477 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 CDKN1CP49918 316 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-219ENST00000556432 VSX2P58304 361 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms