RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 BCL10O95999 233 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 RAF1P04049 648 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 ABCB1P08183 1280 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-218ENST00000556256 VPREB1P12018 145 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 CCR3P51677 355 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 SP3Q02447 781 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 PNRC1Q12796 327 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-218ENST00000556256 ALCAMQ13740 583 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 TMEM266Q2M3C6 531 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 CBWD6Q4V339 395 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 FASTKD1Q53R41 847 aaKnown RBP2.74□□□□□ -1.97
SCFD1-218ENST00000556256 CBWD3Q5JTY5 395 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 C9orf152Q5JTZ5 239 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 RBPMS2Q6ZRY4 209 aaKnown RBP2.74□□□□□ -1.97
SCFD1-218ENST00000556256 GPRIN3Q6ZVF9 776 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 ZNF595Q8IYB9 648 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 TC2NQ8N9U0 490 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 PAPD5Q8NDF8 572 aaKnown RBP2.74□□□□□ -1.97
SCFD1-218ENST00000556256 MCUQ8NE86 351 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 SMPDL3BQ92485 455 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 GPATCH1Q9BRR8 931 aaKnown RBP2.74□□□□□ -1.97
SCFD1-218ENST00000556256 RHNO1Q9BSD3 238 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 TRAF4Q9BUZ4 470 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-218ENST00000556256 SEMA6AQ9H2E6 1030 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 SLA2Q9H6Q3 261 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 APOBEC3GQ9HC16 384 aaKnown RBP2.74□□□□□ -1.97
SCFD1-218ENST00000556256 CHMP1AQ9HD42 196 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-218ENST00000556256 SLC38A7Q9NVC3 462 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 GIMAP2Q9UG22 337 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 RARRES3Q9UL19 164 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 PPIEQ9UNP9 301 aaKnown RBP2.74□□□□□ -1.97
SCFD1-218ENST00000556256 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 TEX13DA0A0J9YY54 714 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-218ENST00000556256 TRBC2A0A5B9 178 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 ZBTB43O43298 467 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 PRAMEF11O60813 436 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 ZWINTO95229 277 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 TFAP2AP05549 437 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 PGFP49763 221 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 MMP15P51511 669 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 LIMK2P53671 638 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 RAD23AP54725 363 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 CD81P60033 236 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 HNRNPKP61978 463 aaKnown RBP eCLIP2.73□□□□□ -1.97
SCFD1-218ENST00000556256 SNRPEP62304 92 aaKnown RBP2.73□□□□□ -1.97
SCFD1-218ENST00000556256 UBXN2AP68543 259 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 NR1D2Q14995 579 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 GRTP1Q5TC63 336 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 ALS2CLQ60I27 953 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 TMEM211Q6ICI0 200 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 LINGO4Q6UY18 593 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 Q6ZSR9 355 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 SLC39A11Q8N1S5 342 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 AFAP1Q8N556 730 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 XXYLT1Q8NBI6 393 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 CFAP61Q8NHU2 1237 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 PTERQ96BW5 349 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 GIMAP5Q96F15 307 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 OXNAD1Q96HP4 312 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-218ENST00000556256 LINC00615Q96LM1 132 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-218ENST00000556256 ZNF830Q96NB3 372 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-218ENST00000556256 ZNF582Q96NG8 517 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-218ENST00000556256 OR6C1Q96RD1 312 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 OLFM1Q99784 485 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 SLX1AQ9BQ83 275 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 CCDC106Q9BWC9 280 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 RAB11FIP5Q9BXF6 653 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 OR10A4Q9H209 315 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 ANKZF1Q9H8Y5 726 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 EQTNQ9NQ60 294 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 ABCB10Q9NRK6 738 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 OLAHQ9NV23 265 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 TAB2Q9NYJ8 693 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 HAO2Q9NYQ3 351 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 PTTG2Q9NZH5 202 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 WDR35Q9P2L0 1181 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 RHCGQ9UBD6 479 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 IL17BQ9UHF5 180 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 OSGIN1Q9UJX0 560 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 CCL27Q9Y4X3 112 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 YIPF1Q9Y548 306 aa2.73□□□□□ -1.97
SCFD1-218ENST00000556256 PRSS51A0A1B0GVH4 220 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 A0A1W2PPM1 405 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 TMEM221A6NGB7 291 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 H7C0S8 307 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 SPRY1O43609 319 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-218ENST00000556256 SSX4O60224 188 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 MED24O75448 989 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 AP2A2O94973 939 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 C22orf31O95567 290 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 FYNP06241 537 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 DANCRP0C864 163 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 CAPZA2P47755 286 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 CDH13P55290 713 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 DLK1P80370 383 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 CDK3Q00526 305 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 MS4A2Q01362 244 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 KRT33BQ14525 404 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 SNAPC1Q16533 368 aa2.72□□□□□ -1.97
SCFD1-218ENST00000556256 TCP11X2Q5H9J9 407 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms