RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 DUSP28Q4G0W2 176 aa3.25□□□□□ -1.89
SCFD1-216ENST00000555550 KRT79Q5XKE5 535 aa3.25□□□□□ -1.89
SCFD1-216ENST00000555550 TEX38Q6PEX7 206 aa3.25□□□□□ -1.89
SCFD1-216ENST00000555550 RPAP2Q8IXW5 612 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-216ENST00000555550 TAGAPQ8N103 731 aa3.25□□□□□ -1.89
SCFD1-216ENST00000555550 NPEPL1Q8NDH3 523 aa3.25□□□□□ -1.89
SCFD1-216ENST00000555550 APPL2Q8NEU8 664 aa3.25□□□□□ -1.89
SCFD1-216ENST00000555550 OR11H4Q8NGC9 324 aa3.25□□□□□ -1.89
SCFD1-216ENST00000555550 EXD1Q8NHP7 514 aa3.25□□□□□ -1.89
SCFD1-216ENST00000555550 BARD1Q99728 777 aaKnown RBP3.25□□□□□ -1.89
SCFD1-216ENST00000555550 PIGQQ9BRB3 760 aa3.25□□□□□ -1.89
SCFD1-216ENST00000555550 SDF4Q9BRK5 362 aa3.25□□□□□ -1.89
SCFD1-216ENST00000555550 CPVLQ9H3G5 476 aa3.25□□□□□ -1.89
SCFD1-216ENST00000555550 SPHK2Q9NRA0 654 aa3.25□□□□□ -1.89
SCFD1-216ENST00000555550 SERINC1Q9NRX5 453 aa3.25□□□□□ -1.89
SCFD1-216ENST00000555550 GKN1Q9NS71 199 aa3.25□□□□□ -1.89
SCFD1-216ENST00000555550 ZNF701Q9NV72 531 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-216ENST00000555550 OR6C2Q9NZP2 312 aa3.25□□□□□ -1.89
SCFD1-216ENST00000555550 ZHX2Q9Y6X8 837 aa3.25□□□□□ -1.89
SCFD1-216ENST00000555550 MYH15Q9Y2K3 1946 aa3.25□□□□□ -1.89
SCFD1-216ENST00000555550 LOC100509620A0A075B734 347 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 EPHB6O15197 1021 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 TRIM21P19474 475 aaKnown RBP3.24□□□□□ -1.89
SCFD1-216ENST00000555550 UGT1A4P22310 534 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 DNASE1P24855 282 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 OPRL1P41146 370 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 HNF4AP41235 474 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 STAT2P52630 851 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 LBX1P52954 281 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 MAZP56270 477 aaKnown RBP3.24□□□□□ -1.89
SCFD1-216ENST00000555550 HUNKP57058 714 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 MS4A2Q01362 244 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 LMOD3Q0VAK6 560 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 WTAPQ15007 396 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 SNAI3Q3KNW1 292 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 TAF1BQ53T94 588 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-216ENST00000555550 C2CD6Q53TS8 623 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 RILPL1Q5EBL4 403 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 SLC25A53Q5H9E4 307 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 LCN1P1Q5VSP4 162 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 TMEM211Q6ICI0 200 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 OR10G8Q8NGN5 311 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 OR52N5Q8NH56 324 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 SMAP2Q8WU79 429 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-216ENST00000555550 LPGAT1Q92604 370 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 AZIN2Q96A70 460 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 JAKMIP2Q96AA8 810 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 OMA1Q96E52 524 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 CALML4Q96GE6 196 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 NSMCE3Q96MG7 304 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 SFXN2Q96NB2 322 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 MS4A10Q96PG2 267 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 KRT12Q99456 494 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 OLFM1Q99784 485 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 FAM49AQ9H0Q0 323 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-216ENST00000555550 OPA3Q9H6K4 179 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 FAM207AQ9NSI2 230 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-216ENST00000555550 DPP3Q9NY33 737 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 WSB2Q9NYS7 404 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-216ENST00000555550 NUDT4Q9NZJ9 180 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 ADD3Q9UEY8 706 aaKnown RBP3.24□□□□□ -1.89
SCFD1-216ENST00000555550 NME7Q9Y5B8 376 aa3.24□□□□□ -1.89
SCFD1-216ENST00000555550 PCDH11YQ9BZA8 1340 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 COL5A2P05997 1499 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-216ENST00000555550 ENO4A6NNW6 628 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 AGAP14A8MT82 685 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 GATA1P15976 413 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-216ENST00000555550 LHCGRP22888 699 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 PTPN3P26045 913 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 GEMIN4P57678 1058 aaKnown RBP3.23□□□□□ -1.89
SCFD1-216ENST00000555550 RAPSNQ13702 412 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 C15orf59Q2T9L4 293 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-216ENST00000555550 RNASEH2BQ5TBB1 312 aaKnown RBP3.23□□□□□ -1.89
SCFD1-216ENST00000555550 ITPRIPL1Q6GPH6 555 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 PAQR6Q6TCH4 344 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 TMEM207Q6UWW9 146 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 GUF1Q8N442 669 aaKnown RBP3.23□□□□□ -1.89
SCFD1-216ENST00000555550 OR6S1Q8NH40 331 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 ZNF519Q8TB69 540 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 PTPMT1Q8WUK0 201 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-216ENST00000555550 SSMEM1Q8WWF3 244 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 SLCO2A1Q92959 643 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 NECTIN4Q96NY8 510 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 RAD9AQ99638 391 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 TREX2Q9BQ50 279 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-216ENST00000555550 LRRC61Q9BV99 259 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 TEX12Q9BXU0 123 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 PANK2Q9BZ23 570 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 GHITMQ9H3K2 345 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 PANK4Q9NVE7 773 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 VPS28Q9UK41 221 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 PPP2R2CQ9Y2T4 447 aa3.23□□□□□ -1.89
SCFD1-216ENST00000555550 ZNF541Q9H0D2 1346 aa3.22□□□□□ -1.89
SCFD1-216ENST00000555550 GPR75-ASB3A0A0A6YYF3 556 aa3.22□□□□□ -1.89
SCFD1-216ENST00000555550 A8MV72 311 aaPredicted RBP3.22□□□□□ -1.89
SCFD1-216ENST00000555550 ADAMDEC1O15204 470 aa3.22□□□□□ -1.89
SCFD1-216ENST00000555550 OR10H2O60403 315 aa3.22□□□□□ -1.89
SCFD1-216ENST00000555550 ZSCAN5DPP0CG00 497 aa3.22□□□□□ -1.89
SCFD1-216ENST00000555550 SMIM18P0DKX4 95 aa3.22□□□□□ -1.89
SCFD1-216ENST00000555550 CSH1P0DML2 217 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms