RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 TKTP29401 623 aaKnown RBP5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 HSD17B3P37058 310 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 PRKCIP41743 596 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 ERVFC1-1P60608 527 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 PTK6Q13882 451 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 VEZF1Q14119 521 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 NPTX1Q15818 432 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 ODF4Q2M2E3 257 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 FAM174BQ3ZCQ3 159 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 MPP7Q5T2T1 576 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 SIX6OS1Q8N1H7 587 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 C9orf106Q8NAJ2 232 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 SLC24A4Q8NFF2 622 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 HSD17B8Q92506 261 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 SLC47A1Q96FL8 570 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 NSL1Q96IY1 281 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 RAD9AQ99638 391 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 PRRG4Q9BZD6 226 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 S1PR5Q9H228 398 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 ALDH8A1Q9H2A2 487 aaPredicted RBP5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 TAAR2Q9P1P5 351 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 IFIT3O14879 490 aaKnown RBP5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 PRKRAO75569 313 aaKnown RBP5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 ZFYP08048 801 aaPredicted RBP5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 ATP5DP30049 168 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 CDH11P55287 796 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 UBASH3AP57075 661 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 LGALS3BPQ08380 585 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 TAF13Q15543 124 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 ZNF672Q499Z4 452 aaPredicted RBP5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 CCDC184Q52MB2 194 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 SPOUT1Q5T280 376 aaKnown RBP5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 CYP4A22Q5TCH4 519 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 DZIP1Q86YF9 867 aaKnown RBP5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 TMEM139Q8IV31 216 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 FOXP4Q8IVH2 680 aaPredicted RBP5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 FAM9BQ8IZU0 186 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 VANGL1Q8TAA9 524 aaPredicted RBP5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 CORO2AQ92828 525 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 MR1Q95460 341 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 SPATA33Q96N06 139 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 INTS14Q96SY0 518 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 ZNF556Q9HAH1 456 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 PELI2Q9HAT8 420 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 DDX43Q9NXZ2 648 aaKnown RBP5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 ERAP1Q9NZ08 941 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 CACNG4Q9UBN1 327 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 DAPK2Q9UIK4 370 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 ACAD8Q9UKU7 415 aa5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 ZFP37Q9Y6Q3 630 aaPredicted RBP5.01□□□□□ -1.61
CKS1BP1-201ENST00000555221 XPNPEP2O43895 674 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 CAVIN2O95810 425 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 CRYAAP02489 173 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 FAM58BPP0C7Q3 252 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 JAK1P23458 1154 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 COPB2P35606 906 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 CRKLP46109 303 aaKnown RBP5□□□□□ -1.61
CKS1BP1-201ENST00000555221 RPL36AP83881 106 aaKnown RBP5□□□□□ -1.61
CKS1BP1-201ENST00000555221 KLC1Q07866 573 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 ZNF415Q09FC8 603 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 ZRSR1Q15695 479 aaKnown RBP5□□□□□ -1.61
CKS1BP1-201ENST00000555221 ITPRIPL2Q3MIP1 535 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 UGT3A2Q3SY77 523 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 LRRC73Q5JTD7 316 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 ANO5Q75V66 913 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 C4orf19Q8IY42 314 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 NDUFAF2Q8N183 169 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 DNAJC22Q8N4W6 341 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 GDAP1Q8TB36 358 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 GRAPLQ8TC17 118 aaPredicted RBP5□□□□□ -1.61
CKS1BP1-201ENST00000555221 GRHL3Q8TE85 626 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 NSMAFQ92636 917 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 PROX1Q92786 737 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 MLPHQ9BV36 600 aaPredicted RBP5□□□□□ -1.61
CKS1BP1-201ENST00000555221 TRMT61BQ9BVS5 477 aaKnown RBP5□□□□□ -1.61
CKS1BP1-201ENST00000555221 COPS7BQ9H9Q2 264 aaPredicted RBP5□□□□□ -1.61
CKS1BP1-201ENST00000555221 A4GALTQ9NPC4 353 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 DONSONQ9NYP3 566 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 DNAJB9Q9UBS3 223 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 TMED3Q9Y3Q3 217 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 ABCC9O60706 1549 aa5□□□□□ -1.61
CKS1BP1-201ENST00000555221 TRAV24A0A0B4J272 114 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 LOC101059948A0A1B0GTJ6 334 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 A0A1W2PPK0 400 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 EME2A4GXA9 379 aaPredicted RBP4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 FAM172BPA6NC97 362 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 ANKRD61A6NGH8 418 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 FGF17O60258 216 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 IGHV4-38-2P0DP08 117 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 PAX1P15863 534 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 NR1D1P20393 614 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 EFNA1P20827 205 aaPredicted RBP4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 MARK3P27448 753 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 TCF7P36402 384 aaPredicted RBP4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 TUBB4BP68371 445 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 PHKG1Q16816 387 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 CDO1Q16878 200 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 PHLDA2Q53GA4 152 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 TECRLQ5HYJ1 363 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 ZNF449Q6P9G9 518 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms