RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 A0A1B0GVC2 190 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 FBP2O00757 339 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 SASH3O75995 380 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 PRAMEF1O95521 474 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ERCC1P07992 297 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 JMJD7P0C870 316 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ACP5P13686 325 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 HK1P19367 917 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 CARD16Q5EG05 197 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 THAP6Q8TBB0 222 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 PURBQ96QR8 312 aaKnown RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ORAI3Q9BRQ5 295 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 PORCNQ9H237 461 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 E9PAM4 449 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 PLD2O14939 933 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 JUNP05412 331 aaKnown RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 HSPA7P48741 367 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 KCNJ2P63252 427 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 SRYQ05066 204 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 BST1Q10588 318 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 EGFLAMQ63HQ2 1017 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ARL9Q6T311 187 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 CMC1Q7Z7K0 106 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF100Q8IYN0 542 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 NXPE1Q8N323 547 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 CPSF7Q8N684 471 aaKnown RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 SAR1AQ9NR31 198 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 REV1Q9UBZ9 1251 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 PCDHGC3Q9UN70 934 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 C2orf92A0A1B0GVN3 265 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 SAGE2PA6NJ88 616 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 TNFRSF10BO14763 440 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 UGT1A3P35503 534 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 TNFSF9P41273 254 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 CXCL9Q07325 125 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 CLEC6AQ6EIG7 209 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ENPP7Q6UWV6 458 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 DNTTIP1Q9H147 329 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 MMADHCQ9H3L0 296 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 GLOD4Q9HC38 313 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ARHGEF4Q9NR80 690 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 MIOSQ9NXC5 875 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF638Q14966 1978 aaKnown RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 PLA2R1Q13018 1463 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 OR6C75A6NL08 312 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 STOMP27105 288 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 RABGGTBP53611 331 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 PRPF38BQ5VTL8 546 aaKnown RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 KANSL1Q7Z3B3 1105 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 GPR142Q7Z601 462 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 TRMT2AQ8IZ69 625 aaKnown RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 PHTF2Q8N3S3 785 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 KIAA0895Q8NCT3 520 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 TWIST2Q8WVJ9 160 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 SLC25A44Q96H78 314 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 TMEM41AQ96HV5 264 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 KCTD15Q96SI1 283 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 LACRTQ9GZZ8 138 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 PCBD2Q9H0N5 130 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 TMEM51Q9NW97 253 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 CALML5Q9NZT1 146 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 TIMM22Q9Y584 194 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 AP4B1Q9Y6B7 739 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 MYO7AQ13402 2215 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 J3QLW9 94 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 LIASO43766 372 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 CSF2P04141 144 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 PRKCGP05129 697 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ACRP10323 421 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF19P17023 458 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 FASTKD3Q14CZ7 662 aaKnown RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 REP15Q6BDI9 236 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ASB18Q6ZVZ8 466 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 OR6N1Q8NGY5 312 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 OR5J2Q8NH18 312 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 PCDHGA10Q9Y5H3 936 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 SHOX2O60902 331 aaPredicted RBP6.75□□□□□ -1.33
SYNE2-216ENST00000555002 XKP51811 444 aa6.75□□□□□ -1.33
SYNE2-216ENST00000555002 AFF1P51825 1210 aaKnown RBP6.75□□□□□ -1.33
SYNE2-216ENST00000555002 FXYD6P3P58550 94 aa6.75□□□□□ -1.33
SYNE2-216ENST00000555002 ACTR1AP61163 376 aa6.75□□□□□ -1.33
SYNE2-216ENST00000555002 PAQR7Q86WK9 346 aa6.75□□□□□ -1.33
SYNE2-216ENST00000555002 MSL3Q8N5Y2 521 aaKnown RBP6.75□□□□□ -1.33
SYNE2-216ENST00000555002 FAM47BQ8NA70 645 aa6.75□□□□□ -1.33
SYNE2-216ENST00000555002 EIF2B4Q9UI10 523 aaKnown RBP6.75□□□□□ -1.33
SYNE2-216ENST00000555002 ANKRD34BA5PLL1 514 aa6.75□□□□□ -1.33
SYNE2-216ENST00000555002 EFCAB9A8MZ26 197 aa6.75□□□□□ -1.33
SYNE2-216ENST00000555002 SFTPBP07988 381 aa6.75□□□□□ -1.33
SYNE2-216ENST00000555002 CD53P19397 219 aa6.75□□□□□ -1.33
SYNE2-216ENST00000555002 CCR3P51677 355 aa6.75□□□□□ -1.33
SYNE2-216ENST00000555002 GCNT1Q02742 428 aa6.75□□□□□ -1.33
SYNE2-216ENST00000555002 DNAJB7Q7Z6W7 309 aaPredicted RBP6.75□□□□□ -1.33
SYNE2-216ENST00000555002 SLC44A3Q8N4M1 653 aa6.75□□□□□ -1.33
SYNE2-216ENST00000555002 CASTOR1Q8WTX7 329 aa6.75□□□□□ -1.33
SYNE2-216ENST00000555002 MAP3K14Q99558 947 aa6.75□□□□□ -1.33
SYNE2-216ENST00000555002 FEM1AQ9BSK4 669 aa6.75□□□□□ -1.33
SYNE2-216ENST00000555002 DUSP16Q9BY84 665 aa6.75□□□□□ -1.33
SYNE2-216ENST00000555002 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.75□□□□□ -1.33
SYNE2-216ENST00000555002 TRIP11Q15643 1979 aa6.75□□□□□ -1.33
SYNE2-216ENST00000555002 A0A0G2JMP0 313 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms