RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 OLIG2Q13516 323 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 TUBA3CQ13748 450 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 SEPT6Q14141 434 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 FXNQ16595 210 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 SMU1Q2TAY7 513 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 ALFQ53S48 1182 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 FAM182AQ5T1J6 154 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 ARHGAP40Q5TG30 622 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 HES3Q5TGS1 186 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 BROXQ5VW32 411 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 ALG1LQ6GMV1 187 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 IYDQ6PHW0 289 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 SPRED1Q7Z699 444 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 EGFL6Q8IUX8 553 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 GALNT4Q8N4A0 578 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 ZNF248Q8NDW4 579 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 TRPV3Q8NET8 790 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 SPATA22Q8NHS9 363 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 STAG3L4Q8TBR4 150 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 LRTOMTQ8WZ04 291 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 PPWD1Q96BP3 646 aaKnown RBP10.89□□□□□ -0.67
SRP54-205ENST00000554803 CELF6Q96J87 481 aaKnown RBP10.89□□□□□ -0.67
SRP54-205ENST00000554803 MAGED4Q96JG8 741 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 C19orf43Q9BQ61 176 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 ZYG11BQ9C0D3 744 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 CCDC68Q9H2F9 335 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 CPNE5Q9HCH3 593 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 SPHK2Q9NRA0 654 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 NDFIP2Q9NV92 336 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 RIC8BQ9NVN3 520 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 DDX18Q9NVP1 670 aaKnown RBP10.89□□□□□ -0.67
SRP54-205ENST00000554803 ZIM2Q9NZV7 527 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 CCDC167Q9P0B6 97 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 LSM7Q9UK45 103 aaKnown RBP10.89□□□□□ -0.67
SRP54-205ENST00000554803 ZNF510Q9Y2H8 683 aa10.89□□□□□ -0.67
SRP54-205ENST00000554803 A0A0J9YYE9 177 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 LOC285095A0A1B0GVY8 99 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 A0A1W2PP18 115 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 DRGXA6NNA5 263 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 F5H5T6 163 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 UBXN8O00124 270 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 AKAP10O43572 662 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 NOL3O60936 208 aaKnown RBP10.88□□□□□ -0.67
SRP54-205ENST00000554803 KERAO60938 352 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 PMPCBO75439 489 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 KATNA1O75449 491 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 LATS1O95835 1130 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 S1PR4O95977 384 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 HPRP00739 348 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 JUNP05412 331 aaKnown RBP10.88□□□□□ -0.67
SRP54-205ENST00000554803 ATP6V1B1P15313 513 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 HTR1EP28566 365 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 OXTRP30559 389 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 SLC7A2P52569 658 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 RPS24P62847 133 aaKnown RBP10.88□□□□□ -0.67
SRP54-205ENST00000554803 RPS6KA2Q15349 733 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 ATP6AP1Q15904 470 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 TYSND1Q2T9J0 566 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 PDCD4Q53EL6 469 aaKnown RBP10.88□□□□□ -0.67
SRP54-205ENST00000554803 TBCELQ5QJ74 424 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 ADGRF1Q5T601 910 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 GRAMD4Q6IC98 578 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 PAOXQ6QHF9 649 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 BLOC1S3Q6QNY0 202 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 ABRAXAS1Q6UWZ7 409 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 RNF165Q6ZSG1 346 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 PRICKLE2Q7Z3G6 844 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 TFAP2DQ7Z6R9 452 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 PATL1Q86TB9 770 aaKnown RBP10.88□□□□□ -0.67
SRP54-205ENST00000554803 ISCA2Q86U28 154 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 FAM217AQ8IXS0 508 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 CACTIN-AS1Q8N1I8 211 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 NKAPQ8N5F7 415 aaKnown RBP10.88□□□□□ -0.67
SRP54-205ENST00000554803 DNAJB8Q8NHS0 232 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 SNRNP27Q8WVK2 155 aaKnown RBP10.88□□□□□ -0.67
SRP54-205ENST00000554803 KIAA1191Q96A73 305 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 NRBF2Q96F24 287 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 RPRD1AQ96P16 312 aaPredicted RBP10.88□□□□□ -0.67
SRP54-205ENST00000554803 DOK1Q99704 481 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 DERL2Q9GZP9 239 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 SP110Q9HB58 689 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 OLAHQ9NV23 265 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 UBP1Q9NZI7 540 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 PKD2L2Q9NZM6 624 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 LEF1Q9UJU2 399 aaPredicted RBP10.88□□□□□ -0.67
SRP54-205ENST00000554803 STOML2Q9UJZ1 356 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 RNF11Q9Y3C5 154 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 SLCO1B1Q9Y6L6 691 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 ITPR2Q14571 2701 aa10.88□□□□□ -0.67
SRP54-205ENST00000554803 C7orf72A4D263 438 aa10.87□□□□□ -0.67
SRP54-205ENST00000554803 TRIM64BA6NI03 449 aa10.87□□□□□ -0.67
SRP54-205ENST00000554803 H0Y8X5 98 aa10.87□□□□□ -0.67
SRP54-205ENST00000554803 GOLGA8TH3BQL2 631 aa10.87□□□□□ -0.67
SRP54-205ENST00000554803 NPC1O15118 1278 aa10.87□□□□□ -0.67
SRP54-205ENST00000554803 EEDO75530 441 aaKnown RBP10.87□□□□□ -0.67
SRP54-205ENST00000554803 SUPT7LO94864 414 aa10.87□□□□□ -0.67
SRP54-205ENST00000554803 OR6B1O95007 311 aa10.87□□□□□ -0.67
SRP54-205ENST00000554803 MT-CYBP00156 380 aaPredicted RBP10.87□□□□□ -0.67
SRP54-205ENST00000554803 IGLV3-19P01714 112 aa10.87□□□□□ -0.67
SRP54-205ENST00000554803 PYGLP06737 847 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms