RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 ANXA9O76027 345 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 LATS1O95835 1130 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PLAUP00749 431 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CXCR1P25024 350 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ITGA7Q13683 1181 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 C9orf50Q5SZB4 431 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 NAPEPLDQ6IQ20 393 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 C3orf33Q6P1S2 294 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 GPR155Q7Z3F1 870 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ECHDC2Q86YB7 292 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 POC5Q8NA72 575 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 FBXO36Q8NEA4 188 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 MAP4K1Q92918 833 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 REEP1Q9H902 201 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ERVK-5Q9HDB9 667 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PCDHGA2Q9Y5H1 932 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 AQP7O14520 342 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SMAD7O15105 426 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 RAD51CO43502 376 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TSPAN6O43657 245 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CMPK1P30085 196 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TAS2R40P59535 323 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 GANABQ14697 944 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 THOC7Q6I9Y2 204 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 STYK1Q6J9G0 422 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PDE12Q6L8Q7 609 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 NOTUMQ6P988 496 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF283Q8N7M2 679 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 C12orf29Q8N999 325 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CD300LFQ8TDQ1 290 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PTCD2Q8WV60 388 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 FOXRED1Q96CU9 486 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 AP2M1Q96CW1 435 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 BSCL2Q96G97 398 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ERP44Q9BS26 406 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 NMNAT1Q9HAN9 279 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 AUP1Q9Y679 476 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 RGPD2P0DJD1 1756 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ATXN7O15265 892 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CLN5O75503 358 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CYB5AP00167 134 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 GSTT1P30711 240 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 FPGSQ05932 587 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PTPAQ15257 358 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 MAPK14Q16539 360 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 MSANTD2Q6P1R3 559 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 GPR142Q7Z601 462 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PROM2Q8N271 834 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PDCD11Q14690 1871 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 UBE2QL1A1L167 161 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CDK2AP1O14519 115 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TOR1BO14657 336 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PHF2O75151 1096 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 NOL4O94818 638 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 THRAP10827 490 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 UQCRBP14927 111 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CRHBPP24387 322 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 EPHA3P29320 983 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SSTR1P30872 391 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 FASTKQ14296 549 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ITIH4Q14624 930 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 LINC00696Q6ZRV3 163 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 HERC2P3Q9BVR0 1158 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 OR8D2Q9GZM6 311 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 NMRK1Q9NWW6 199 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 MARCH2Q9P0N8 246 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 AGXTP21549 392 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 FMO5P49326 533 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 EMP3P54852 163 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ARHGAP36Q6ZRI8 547 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF572Q7Z3I7 529 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 EGFL6Q8IUX8 553 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 DEFB107AQ8IZN7 70 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CPA6Q8N4T0 437 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TMEM161BQ8NDZ6 487 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PPCDCQ96CD2 204 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 COX4I2Q96KJ9 171 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PLEKHG4BQ96PX9 1271 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TMEM237Q96Q45 408 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 NPAS2Q99743 824 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 MTFR1LQ9H019 292 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 POT1Q9NUX5 634 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 OPTCQ9UBM4 332 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 UPB1Q9UBR1 384 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 NPIPA5A0A0B4J1W7 369 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 NPIPA7E9PJI5 369 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CHP2O43745 196 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 NPIPA8P0DM63 369 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ACTR1BP42025 376 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 NR4A2P43354 598 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CHRNA4P43681 627 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ACTR1AP61163 376 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 XKR3Q5GH77 459 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 FAM92BQ6ZTR7 304 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 GDPD3Q7L5L3 318 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SLFN11Q7Z7L1 901 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 JAGN1Q8N5M9 183 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 HDAC2Q92769 488 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ARRDC3Q96B67 414 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SLC6A7Q99884 636 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms