RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 THAP4Q8WY91 577 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 LPGAT1Q92604 370 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 RAD51AP1Q96B01 352 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 RUNDC3BQ96NL0 473 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 BIRC8Q96P09 236 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 SERPINB12Q96P63 405 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 KRT12Q99456 494 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 C17orf62Q9BQA9 187 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 RAB11FIP5Q9BXF6 653 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 NLNQ9BYT8 704 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 CHST8Q9H2A9 424 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 ACTL8Q9H568 366 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 AKIRIN1Q9H9L7 192 aaPredicted RBP8.42□□□□□ -1.06
ACTN1-213ENST00000554508 FAM60AQ9NP50 221 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 PCMTD2Q9NV79 361 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 INTS7Q9NVH2 962 aaKnown RBP8.42□□□□□ -1.06
ACTN1-213ENST00000554508 INTS10Q9NVR2 710 aaKnown RBP8.42□□□□□ -1.06
ACTN1-213ENST00000554508 SPHK1Q9NYA1 384 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 SLC39A10Q9ULF5 831 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 PLAGL1Q9UM63 463 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 KCNMB2Q9Y691 235 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 GOLGA8KD6RF30 607 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 GOLGA8TH3BQL2 631 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 RASGRF2O14827 1237 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 ZNF749O43361 778 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 SUV39H1O43463 412 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 OR2B3O76000 313 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 USP1O94782 785 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 TMEM63AO94886 807 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 C1orf105O95561 183 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 CD63P08962 238 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 FURINP09958 794 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 PKMP14618 531 aaKnown RBP8.41□□□□□ -1.06
ACTN1-213ENST00000554508 CHRM3P20309 590 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 AGXTP21549 392 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 ATP5DP30049 168 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 PEBP1P30086 187 aaKnown RBP8.41□□□□□ -1.06
ACTN1-213ENST00000554508 MAGEA3P43357 314 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 GABRA4P48169 554 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 GRB7Q14451 532 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 ZIC1Q15915 447 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 UGT8Q16880 541 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 ATP1A1-AS1Q5TC04 95 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 TLDC1Q6P9B6 456 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 ATG14Q6ZNE5 492 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 PRICKLE2Q7Z3G6 844 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 PCGF5Q86SE9 256 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 TRIM73Q86UV7 250 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 CILP2Q8IUL8 1156 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 APLFQ8IW19 511 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-213ENST00000554508 DNAJC22Q8N4W6 341 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 NAT8LQ8N9F0 302 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 C9orf43Q8TAL5 461 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-213ENST00000554508 HMGCLL1Q8TB92 370 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 CALML6Q8TD86 181 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 DENND1AQ8TEH3 1009 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 SKA2Q8WVK7 121 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-213ENST00000554508 ZUFSPQ96AP4 578 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 ABHD17AQ96GS6 310 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 SIGLEC10Q96LC7 697 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 MENTQ9BUN1 341 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 KLHL25Q9H0H3 589 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-213ENST00000554508 KLHL42Q9P2K6 505 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 PCYOX1Q9UHG3 505 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 PLCL2Q9UPR0 1127 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 MAN2B2Q9Y2E5 1009 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 CRYL1Q9Y2S2 319 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 COMMD10Q9Y6G5 202 aa8.41□□□□□ -1.06
ACTN1-213ENST00000554508 BOD1L1Q8NFC6 3051 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 ZCWPW2A0A1B0GU75 182 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 TARM1B6A8C7 271 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 C9J4A7 227 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 E5RI56 91 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 H3BMH7 237 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 MKRN2OSH3BPM6 223 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 GOLGA8MH3BSY2 632 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 PRICKLE3O43900 615 aaPredicted RBP8.4□□□□□ -1.06
ACTN1-213ENST00000554508 ZNF500O60304 480 aaPredicted RBP8.4□□□□□ -1.06
ACTN1-213ENST00000554508 NIPSNAP2O75323 286 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 RFPL1O75677 317 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 MATN4O95460 622 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 CAPN1P07384 714 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 PTGIRP43119 386 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 PMS2P54278 862 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 RPS18P62269 152 aaKnown RBP8.4□□□□□ -1.06
ACTN1-213ENST00000554508 GBX1Q14549 363 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 SF1Q15637 639 aaKnown RBP8.4□□□□□ -1.06
ACTN1-213ENST00000554508 LONRF1Q17RB8 773 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 TTLL9Q3SXZ7 439 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 ZC3H12BQ5HYM0 836 aaKnown RBP8.4□□□□□ -1.06
ACTN1-213ENST00000554508 PRAMEF17Q5VTA0 474 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 RHBDD2Q6NTF9 364 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 TCTN3Q6NUS6 607 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 FIGLAQ6QHK4 219 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 NEK10Q6ZWH5 1172 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 CENPUQ71F23 418 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 SYTL1Q8IYJ3 562 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 ZBTB2Q8N680 514 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 ENDOVQ8N8Q3 282 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms